RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 RIPK1Q13546 671 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TMEM119Q4V9L6 283 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 C16orf46Q6P387 395 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF730Q6ZMV8 503 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 C8orf4Q9NR00 106 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 KLF15Q9UIH9 416 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 MGAT4AQ9UM21 535 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 MROH2AA6NES4 1674 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 RSL1D1O76021 490 aaKnown RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 NAGLUP54802 743 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 GPC2Q8N158 579 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 C3orf14Q9HBI5 128 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ASF1AQ9Y294 204 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ZBTB22O15209 634 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TLL1O43897 1013 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 LRATO95237 230 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 DNTTP04053 509 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TFPIP10646 304 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TFEBP19484 476 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 C15orf59Q2T9L4 293 aaPredicted RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 CCDC54Q8NEL0 328 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ELMO3Q96BJ8 720 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TRIM2Q9C040 744 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ABCB10Q9NRK6 738 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 IFNA6P05013 189 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 LGALS2P05162 132 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 RFTN2Q52LD8 501 aaPredicted RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 USP50Q70EL3 339 aaPredicted RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 FIBCD1Q8N539 461 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 PCDH20Q8N6Y1 951 aaKnown RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 MTMR8Q96EF0 704 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 LINGO1Q96FE5 620 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 DDTLA6NHG4 134 aaPredicted RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 WNT10BO00744 389 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 RPS6KA3P51812 740 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 SNAP47Q5SQN1 464 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TMEM63BQ5T3F8 832 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TMC8Q8IU68 726 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 MCEMP1Q8IX19 187 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 UBR7Q8N806 425 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 OR4L1Q8NH43 312 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 GDF3Q9NR23 364 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 TRMT13Q9NUP7 481 aaKnown RBP12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ACTL7BQ9Y614 415 aa12.07□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF879B4DU55 563 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PIK3R6Q5UE93 754 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 RASSF6Q6ZTQ3 369 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PLEKHG4BQ96PX9 1271 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TMPRSS4Q9NRS4 437 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 DHRS12A0PJE2 317 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 KELP23276 732 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 CNTN2Q02246 1040 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TRAP1Q12931 704 aaKnown RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PTGR2Q8N8N7 351 aaPredicted RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF670Q9BS34 389 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 FKBP14Q9NWM8 211 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 C15orf41Q9Y2V0 281 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PRKG2Q13237 762 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PPCDCQ96CD2 204 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ZBTB45Q96K62 511 aaPredicted RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 OSBPL11Q9BXB4 747 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 BHLHE41Q9C0J9 482 aaPredicted RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 F8VP50 259 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 LINC00032P0C843 101 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ZDHHC20Q5W0Z9 365 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 GJD3Q8N144 294 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 CAPSLQ8WWF8 208 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PIGKQ92643 395 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 CLIC5Q9NZA1 410 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PSMG1O95456 288 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 SAGP10523 405 aaPredicted RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 MNDAP41218 407 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 FAM151BQ6UXP7 276 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ALLCQ8N6M5 410 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 CLP1Q92989 425 aaKnown RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ANKZF1Q9H8Y5 726 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 ATG13O75143 517 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PSIP1O75475 530 aaKnown RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 BICRALQ6AI39 1079 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 OR10H5Q8NGA6 315 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 HELQQ8TDG4 1101 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 FAR1Q8WVX9 515 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 HSFY1Q96LI6 401 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 CHST10O43529 356 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms