RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SPTA1P02549 2419 aa10.63□□□□□ -0.71
RPAIN-204ENST00000405578 A0A1W2PP55 124 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 LRRC72A6NJI9 287 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 C16orf96A6NNT2 1141 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 NEMP1O14524 444 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GCATO75600 419 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ANXA9O76027 345 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 URI1O94763 535 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GAS8O95995 478 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 IGLV3-19P01714 112 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CTSLP07711 333 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GNSP15586 552 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CR2P20023 1033 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 MAOBP27338 520 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CD6P30203 668 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GKP32189 559 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CD86P42081 329 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 FNTAP49354 379 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 EPHB1P54762 984 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 DSC2Q02487 901 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CKAP4Q07065 602 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 SIX1Q15475 284 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 OASLQ15646 514 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 SLC14A2Q15849 920 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 POM121L1PQ3SYA9 428 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ANKRD20A2Q5SQ80 823 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ARMC12Q5T9G4 340 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ANKRD20A1Q5TYW2 823 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ANKRD20A3Q5VUR7 823 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 ERAP2Q6P179 960 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 TTC7BQ86TV6 843 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CAMK1DQ8IU85 385 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CREG2Q8IUH2 290 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GALNT15Q8N3T1 639 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 PGBD5Q8N414 524 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CNTD1Q8N815 330 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 PRELID2Q8N945 189 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 OR14C36Q8NHC7 312 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 BAHD1Q8TBE0 780 aaPredicted RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 IMP4Q96G21 291 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 FCRL5Q96RD9 977 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 GBA3Q9H227 469 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 PRORYQ9H606 182 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 IL21RQ9HBE5 538 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CD93Q9NPY3 652 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 USP36Q9P275 1121 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 PAK5Q9P286 719 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 FAM153AQ9UHL3 310 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 SARDHQ9UL12 918 aa10.62□□□□□ -0.71
RPAIN-204ENST00000405578 TPX2Q9ULW0 747 aaKnown RBP10.62□□□□□ -0.71
RPAIN-204ENST00000405578 CCDC188H7C350 402 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PSMD3O43242 534 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PHF2O75151 1096 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 DKK1O94907 266 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PIGNO95427 931 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 NFKB1P19838 968 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 GEMP55040 296 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 RPL26P61254 145 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 ELP6Q0PNE2 266 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 CNTN1Q12860 1018 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 MPP3Q13368 585 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 CYP1B1Q16678 543 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PARP6Q2NL67 630 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 SYCP2LQ5T4T6 812 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 CCDC137Q6PK04 289 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 FAM124AQ86V42 546 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 AADATQ8N5Z0 425 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PDCD7Q8N8D1 485 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 ARRDC2Q8TBH0 407 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 CCDC110Q8TBZ0 833 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 FOXJ1Q92949 421 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 TOE1Q96GM8 510 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 ZNF419Q96HQ0 510 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 FCRL3Q96P31 734 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 FSD1LQ9BXM9 530 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 ZDHHC5Q9C0B5 715 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PCED1AQ9H1Q7 454 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 NEUROG2Q9H2A3 272 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 C10orf88Q9H8K7 445 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 CDC23Q9UJX2 597 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 RPL26L1Q9UNX3 145 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 FNDC3AQ9Y2H6 1198 aaKnown RBP10.61□□□□□ -0.71
RPAIN-204ENST00000405578 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3DA0A087WVF3 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3IA0A087WXS9 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3EA0A087X179 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3KA0A087X1G2 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TSPAN11A1L157 253 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3FA6NER0 549 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3LB9A6J9 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 E7EVH7 732 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 HTRA2O43464 458 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms