RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 GPR150Q8NGU9 434 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 CEP70Q8NHQ1 597 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 RCN3Q96D15 328 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 ZNF512Q96ME7 567 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 TRIB3Q96RU7 358 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 MGME1Q9BQP7 344 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 NACA2Q9H009 215 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 EML4Q9HC35 981 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 H3BNC9 293 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 SKAP2O75563 359 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 SMNDC1O75940 238 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■□□ 16.2
DNMT3A-205ENST00000402667 SLC4A1P02730 911 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 RPL17P18621 184 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 SLC11A2P49281 568 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 RPS24P62847 133 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 KLC1Q07866 573 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 HERC3Q15034 1050 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 MRNIPQ6NTE8 343 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 C16orf89Q6UX73 402 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 CUZD1Q86UP6 607 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 HIPK4Q8NE63 616 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 CAPNS2Q96L46 248 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 NSMCE3Q96MG7 304 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 SPON2Q9BUD6 331 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 PACSIN3Q9UKS6 424 aa16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 PRPF19Q9UMS4 504 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-205ENST00000402667 NDST3O95803 873 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 IMPDH1P20839 514 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 FDXRP22570 491 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 CDH4P55283 916 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 TIAL1Q01085 375 aaKnown RBP eCLIP16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 SATB1Q01826 763 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 SLC8B1Q6J4K2 584 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 DENND1CQ8IV53 801 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 BBS5Q8N3I7 341 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 MICAL1Q8TDZ2 1067 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 FAR2Q96K12 515 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 PSKH2Q96QS6 385 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 SEPT3Q9UH03 358 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 ZNF840PA6NDX5 716 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 OR1D2P34982 312 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 RGRP47804 291 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 GALNT1Q10472 559 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 IRGCQ6NXR0 463 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 DHDDSQ86SQ9 333 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 PELI3Q8N2H9 469 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 OR4L1Q8NH43 312 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 PTERQ96BW5 349 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 GSTO2Q9H4Y5 243 aa16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 UBA2Q9UBT2 640 aaPredicted RBP16.98■□□□□ 0.31
DNMT3A-205ENST00000402667 COCHO43405 550 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 KLKB1P03952 638 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 TUFMP49411 452 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 HECTD3Q5T447 861 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 IZUMO2Q6UXV1 221 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CDKN2AIPNLQ96HQ2 116 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 PRICKLE1Q96MT3 831 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CDRT15Q96T59 188 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CINPQ9BW66 212 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CATSPERZQ9NTU4 200 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 MTRRQ9UBK8 725 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 STK39Q9UEW8 545 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 RIMKLBQ9ULI2 386 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 A6NHS1 94 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 KDELR3O43731 214 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CD1DP15813 335 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 OXCT1P55809 520 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 MRPS35P82673 323 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 ILF2Q12905 390 aaKnown RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 KBTBD6Q86V97 674 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 AFAP1L2Q8N4X5 818 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 SERPINI1Q99574 410 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 EFCAB1Q9HAE3 211 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 MEAF6Q9HAF1 191 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 CORO1CQ9ULV4 474 aaPredicted RBP16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 SPO11Q9Y5K1 396 aa16.97■□□□□ 0.31
DNMT3A-205ENST00000402667 TCAF2A6NFQ2 919 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 UBFD1O14562 309 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 OGNP20774 298 aaKnown RBP16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 SCNN1BP51168 640 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 SGSHP51688 502 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 DSG1Q02413 1049 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 ZNF678Q5SXM1 525 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 BNC2Q6ZN30 1099 aaPredicted RBP16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 CHSY3Q70JA7 882 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 SDCCAG8Q86SQ7 713 aaPredicted RBP16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 PDZD8Q8NEN9 1154 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 L3HYPDHQ96EM0 354 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 SCLYQ96I15 445 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 EXOC2Q96KP1 924 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 ECSITQ9BQ95 431 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms