RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 IL22Q9GZX6 179 aa14.17□□□□□ -0.14
ATG3-202ENST00000402314 CLK4Q9HAZ1 481 aaKnown RBP14.17□□□□□ -0.14
ATG3-202ENST00000402314 NEU3Q9UQ49 428 aa14.17□□□□□ -0.14
ATG3-202ENST00000402314 TSC22D4Q9Y3Q8 395 aa14.17□□□□□ -0.14
ATG3-202ENST00000402314 MATN2O00339 956 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 TNPO2O14787 897 aaKnown RBP14.16□□□□□ -0.14
ATG3-202ENST00000402314 HLA-DQB2P05538 268 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 ATP5BP06576 529 aaKnown RBP14.16□□□□□ -0.14
ATG3-202ENST00000402314 TMED10P49755 219 aaKnown RBP14.16□□□□□ -0.14
ATG3-202ENST00000402314 PFKPQ01813 784 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 NAB1Q13506 487 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 PRPSAP1Q14558 356 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 AGKQ53H12 422 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 PERM1Q5SV97 790 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 C6orf183Q5T699 404 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 GPR180Q86V85 440 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 IFNEQ86WN2 208 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 TMEM86AQ8N2M4 240 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 DDHD1Q8NEL9 900 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 GABPB2Q8TAK5 448 aaPredicted RBP14.16□□□□□ -0.14
ATG3-202ENST00000402314 SLCO4A1Q96BD0 722 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 ARHGAP39Q9C0H5 1083 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 MUC3BQ9H195 1237 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 CDYLQ9Y232 598 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 PCSK1P29120 753 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 GRIK1P39086 918 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 ALDH3B2P48448 385 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 NUP107P57740 925 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 DENND5AQ6IQ26 1287 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 TAF2Q6P1X5 1199 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 LRCH3Q96II8 777 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 KLHL5Q96PQ7 755 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 PCDH12Q9NPG4 1184 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 RBM22Q9NW64 420 aaKnown RBP eCLIP14.16□□□□□ -0.14
ATG3-202ENST00000402314 SMOXQ9NWM0 555 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 XPR1Q9UBH6 696 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 TRHDEQ9UKU6 1024 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 PTCH2Q9Y6C5 1203 aa14.16□□□□□ -0.14
ATG3-202ENST00000402314 NCAM2O15394 837 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 F9P00740 461 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 EEF1B2P24534 225 aaKnown RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 HCAR3P49019 387 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 INTS6LQ5JSJ4 861 aaKnown RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 ZNF362Q5T0B9 420 aaPredicted RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 DCDC5Q6ZRR9 648 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 CARM1Q86X55 608 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 ZC3H7AQ8IWR0 971 aaKnown RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 PGAP3Q96FM1 320 aaPredicted RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 TBL1YQ9BQ87 522 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 CORO1BQ9BR76 489 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 KATNAL1Q9BW62 490 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 PIF1Q9H611 641 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 PNPLA3Q9NST1 481 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 OXSMQ9NWU1 459 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 OSER1Q9NX31 292 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 CNOT6Q9ULM6 557 aaKnown RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 TMEM247A6NEH6 219 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 MAFKO60675 156 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 GJB3O75712 270 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 NPY2RP49146 381 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 CLCN2P51788 898 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 BMXP51813 675 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 TAS2R39P59534 338 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 NR1D2Q14995 579 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 RBM20Q5T481 1227 aaKnown RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 ZNF470Q6ECI4 717 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 OVOS1Q6IE37 1185 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 NAPEPLDQ6IQ20 393 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 DCLRE1AQ6PJP8 1040 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 BTLAQ7Z6A9 289 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 SLC15A3Q8IY34 581 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 IRGQQ8WZA9 623 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 ISL2Q96A47 359 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 ADAM2Q99965 735 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 HEPHQ9BQS7 1158 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 MTG1Q9BT17 334 aaPredicted RBP14.15□□□□□ -0.14
ATG3-202ENST00000402314 RRAGCQ9HB90 399 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 ADAM28Q9UKQ2 775 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 DGKBQ9Y6T7 804 aa14.15□□□□□ -0.14
ATG3-202ENST00000402314 H3BMQ9 156 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 TIMM44O43615 452 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 DLX3O60479 287 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 TBX18O95935 607 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 HOXC8P31273 242 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 SLC1A2P43004 574 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 RPL26P61254 145 aaKnown RBP14.15□□□□□ -0.15
ATG3-202ENST00000402314 YBX1P67809 324 aaKnown RBP14.15□□□□□ -0.15
ATG3-202ENST00000402314 PRKCQQ04759 706 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 DDR2Q16832 855 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 BTBD8Q5XKL5 378 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 BORAQ6PGQ7 559 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 SCD5Q86SK9 330 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 PARP8Q8N3A8 854 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 SLC15A4Q8N697 577 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 COG8Q96MW5 612 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 GPR22Q99680 433 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 MCMBPQ9BTE3 642 aa14.15□□□□□ -0.15
ATG3-202ENST00000402314 GLOD4Q9HC38 313 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms