RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 ERAP2Q6P179 960 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 LIPIQ6XZB0 460 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 USP45Q70EL2 814 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 TMEFF1Q8IYR6 380 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 OR2T34Q8NGX1 318 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 LRRC45Q96CN5 670 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 MAGEE1Q9HCI5 957 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 HCN4Q9Y3Q4 1203 aa15.99■□□□□ 0.15
HMGA1-204ENST00000401473 RIF1Q5UIP0 2472 aaKnown RBP15.98■□□□□ 0.15
HMGA1-204ENST00000401473 IGLON5A6NGN9 336 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 CAPN8A6NHC0 703 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 GOLGA8CPA6NN73 597 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 GOLGA8MH3BSY2 632 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 TSPAN6O43657 245 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 AVILO75366 819 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 SEC31AO94979 1220 aaKnown RBP15.98■□□□□ 0.15
HMGA1-204ENST00000401473 FGF1P05230 155 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 GM2AP17900 193 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 TPSB2P20231 275 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 PTPN5P54829 565 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 RPL6Q02878 288 aaKnown RBP15.98■□□□□ 0.15
HMGA1-204ENST00000401473 FGL2Q14314 439 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 TPSAB1Q15661 275 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 TMEM52BQ4KMG9 183 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 DPPA4Q7L190 304 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 SLC41A1Q8IVJ1 513 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 KLK6Q92876 244 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 BIRC7Q96CA5 298 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 SPACA7Q96KW9 195 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 PREBQ9HCU5 417 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 CASS4Q9NQ75 786 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 MYLKQ15746 1914 aa15.98■□□□□ 0.15
HMGA1-204ENST00000401473 A0A1W2PQU0 124 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 LRRC72A6NJI9 287 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 RNGTTO60942 597 aaKnown RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 IGHV4-34P06331 123 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 MAT2AP31153 395 aaKnown RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 CDK16Q00536 496 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 CNGA3Q16281 694 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 TMEM259Q4ZIN3 620 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 CERCAMQ5T4B2 595 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 IZUMO3Q5VZ72 239 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 LRRC66Q68CR7 880 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 NEK5Q6P3R8 708 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 RFLNAQ6ZTI6 216 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 LINC00523Q86TU6 105 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 CAND1Q86VP6 1230 aaKnown RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 PPIL6Q8IXY8 311 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 NDUFAF2Q8N183 169 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 ATOH1Q92858 354 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 DUSP15Q9H1R2 295 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 DPH5Q9H2P9 285 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 RRAGDQ9NQL2 400 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 COQ6Q9Y2Z9 468 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 METTL12A8MUP2 240 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 MAP3K13O43283 966 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 NDUFS2O75306 463 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 HEXIM1O94992 359 aaKnown RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 PAK4O96013 591 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 VIPR1P32241 457 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 CNR2P34972 360 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 PTGER3P43115 390 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 ZNF284Q2VY69 593 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 DENND2CQ68D51 928 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 HIBCHQ6NVY1 386 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 LYSMD3Q7Z3D4 306 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 DNAAF3Q8N9W5 541 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 BLOC1S5Q8TDH9 187 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 PWWP2AQ96N64 755 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 GRHL1Q9NZI5 618 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 UTP11Q9Y3A2 253 aaKnown RBP15.97■□□□□ 0.15
HMGA1-204ENST00000401473 SLCO1B1Q9Y6L6 691 aa15.97■□□□□ 0.15
HMGA1-204ENST00000401473 OTOGLQ3ZCN5 2332 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 C1orf232A0A0U1RR37 186 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 ESYT3A0FGR9 886 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
HMGA1-204ENST00000401473 LATO43561 262 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 ITGA8P53708 1063 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 RPS21P63220 83 aaKnown RBP15.96■□□□□ 0.15
HMGA1-204ENST00000401473 CDH17Q12864 832 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 PLK5Q496M5 336 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 LRRC8BQ6P9F7 803 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 SLC36A4Q6YBV0 504 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 HSD11B1LQ7Z5J1 315 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 TMC3Q7Z5M5 1100 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 HORMAD1Q86X24 394 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 CADM4Q8NFZ8 388 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 SNF8Q96H20 258 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 PHOX2BQ99453 314 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 ORAI3Q9BRQ5 295 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 ZFYVE1Q9HBF4 777 aa15.96■□□□□ 0.15
HMGA1-204ENST00000401473 CACNA1EQ15878 2313 aa15.96■□□□□ 0.14
HMGA1-204ENST00000401473 BUD23O43709 281 aaKnown RBP15.95■□□□□ 0.14
HMGA1-204ENST00000401473 FSBPO95073 299 aa15.95■□□□□ 0.14
HMGA1-204ENST00000401473 ELFN1P0C7U0 828 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms