RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 CCDC140Q96MF4 163 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 NEU1Q99519 415 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 CDX2Q99626 313 aaPredicted RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 FERMT1Q9BQL6 677 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 FUZQ9BT04 418 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 TDRD1Q9BXT4 1180 aaKnown RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 TRIM31Q9BZY9 425 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 IKZF4Q9H2S9 585 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 SP110Q9HB58 689 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 IL21RQ9HBE5 538 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 PAK6Q9NQU5 681 aaPredicted RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 SENP1Q9P0U3 644 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 SH3BP4Q9P0V3 963 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 GULP1Q9UBP9 304 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 DBF4Q9UBU7 674 aaPredicted RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 ATXN7L1Q9ULK2 861 aaPredicted RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 PTRH2Q9Y3E5 179 aaKnown RBP3.96□□□□□ -1.78
CLHC1-201ENST00000401408 HRH3Q9Y5N1 445 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 SALL3Q9BXA9 1300 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 MAPK8IP3Q9UPT6 1336 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 BAHCC1Q9P281 2608 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 PKD1L2Q7Z442 2459 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 MAST2Q6P0Q8 1798 aa3.96□□□□□ -1.78
CLHC1-201ENST00000401408 A0A1B0GTQ1 180 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 A0A1W2PN81 502 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LIPT2A6NK58 231 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 OR6C75A6NL08 312 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SLC33A1O00400 549 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CTDSP2O14595 271 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SMAD9O15198 467 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RAD51BO15315 384 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TRAPPC3O43617 180 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CCNT1O60563 726 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LGI1O95970 557 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CHEK2O96017 543 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CYP1A1P04798 512 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 GLI1P08151 1106 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MYZAPP0CAP1 466 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 THRBP10828 461 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MTHFD2P13995 350 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PDE6AP16499 860 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 EPORP19235 508 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CALB2P22676 271 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SP100P23497 879 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ARNTP27540 789 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RRM2P31350 389 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SFNP31947 248 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CHRNA7P36544 502 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 FASLGP48023 281 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MRPL12P52815 198 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 BCAT1P54687 386 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NOMO3P69849 1222 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NCBP1Q09161 790 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SCAPQ12770 1279 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SNTB1Q13884 538 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MOGQ16653 247 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ARHGAP44Q17R89 818 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 HYAL4Q2M3T9 481 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PRICKLE4Q2TBC4 344 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NOMO2Q5JPE7 1267 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 RARS2Q5T160 578 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TTC23LQ6PF05 361 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CES3Q6UWW8 571 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 C17orf99Q6UX52 265 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ADAMTSL4Q6UY14 1074 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ERN2Q76MJ5 926 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CUZD1Q86UP6 607 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LRRC6Q86X45 466 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MAPKAPK5Q8IW41 473 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KLHL7Q8IXQ5 586 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ST13P4Q8IZP2 240 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 OR14C36Q8NHC7 312 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MAFAQ8NHW3 353 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 B4GALNT2Q8NHY0 566 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DUSP19Q8WTR2 217 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NRG4Q8WWG1 115 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SEPT8Q92599 483 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SLAMF9Q96A28 289 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KIAA1143Q96AT1 154 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 PNMA5Q96PV4 448 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 OR1F2PQ96R84 312 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 INTS14Q96SY0 518 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DBNDD2Q9BQY9 259 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SF3B5Q9BWJ5 86 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 USP26Q9BXU7 913 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 WDR11Q9BZH6 1224 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 NKX2-4Q9H2Z4 354 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 HIPK3Q9H422 1215 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZMAT4Q9H898 229 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ZNF395Q9H8N7 513 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TUFT1Q9NNX1 390 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 KCNH7Q9NS40 1196 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 LARSQ9P2J5 1176 aaKnown RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 CGGBP1Q9UFW8 167 aaPredicted RBP3.95□□□□□ -1.78
CLHC1-201ENST00000401408 SRRDQ9UH36 339 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 MSRAQ9UJ68 235 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 ADAMTS6Q9UKP5 1117 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 DSEQ9UL01 958 aa3.95□□□□□ -1.78
CLHC1-201ENST00000401408 TTC7AQ9ULT0 858 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms