RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 LIPIQ6XZB0 460 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 ARHGAP36Q6ZRI8 547 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 SRLQ86TD4 932 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 JPH3Q8WXH2 748 aaPredicted RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 PMEPA1Q969W9 287 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 SLC39A8Q9C0K1 460 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 DPEP2Q9H4A9 486 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 RDH14Q9HBH5 336 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 CYP4F12Q9HCS2 524 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 SEPT11Q9NVA2 429 aaKnown RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 DACH1Q9UI36 760 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 MOSPD1Q9UJG1 213 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 SIK3Q9Y2K2 1263 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 TTC24A2A3L6 582 aaPredicted RBP11.96□□□□□ -0.49
LINC00544-201ENST00000400540 FGF10O15520 208 aaPredicted RBP11.96□□□□□ -0.49
LINC00544-201ENST00000400540 TEX33O43247 280 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 ITGB2P05107 769 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 CCL4P13236 92 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 PNLIPP16233 465 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 SERPINA4P29622 427 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 STAT1P42224 750 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 CSRP3P50461 194 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 PAPOLAP51003 745 aaKnown RBP11.96□□□□□ -0.49
LINC00544-201ENST00000400540 ARSDP51689 593 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 OR1D5P58170 312 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 B4GALNT1Q00973 533 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 ARHGEF7Q14155 803 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 GRM3Q14832 879 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 TBR1Q16650 682 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 MAP9Q49MG5 647 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 CDKAL1Q5VV42 579 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 DPPA4Q7L190 304 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 DTX1Q86Y01 620 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 RCBTB1Q8NDN9 531 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
LINC00544-201ENST00000400540 ECHDC3Q96DC8 303 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 CMKLR1Q99788 373 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 NUDT22Q9BRQ3 303 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 ATP13A3Q9H7F0 1226 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
LINC00544-201ENST00000400540 SEPT10Q9P0V9 454 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 IL17BQ9UHF5 180 aa11.96□□□□□ -0.49
LINC00544-201ENST00000400540 PRSS38A1L453 326 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 B4GAT1O43505 415 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 NUDT21O43809 227 aaKnown RBP11.95□□□□□ -0.5
LINC00544-201ENST00000400540 PALMO75781 387 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 FUCA1P04066 466 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 TRIM23P36406 574 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 NDST2P52849 883 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 AIF1P55008 147 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 CLCA4Q14CN2 919 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 AMZ1Q400G9 498 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 ZNF574Q6ZN55 896 aaPredicted RBP11.95□□□□□ -0.5
LINC00544-201ENST00000400540 NRROSQ86YC3 692 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 ARHGAP12Q8IWW6 846 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 NPWQ8N729 165 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 PATE1Q8WXA2 126 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 CNPY3Q9BT09 278 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 FUCA2Q9BTY2 467 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 CINPQ9BW66 212 aaPredicted RBP11.95□□□□□ -0.5
LINC00544-201ENST00000400540 NUP62CLQ9H1M0 184 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 WDR26Q9H7D7 661 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 ST14Q9Y5Y6 855 aa11.95□□□□□ -0.5
LINC00544-201ENST00000400540 SPTA1P02549 2419 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 A0A1W2PQC6 194 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 CFAP69A5D8W1 941 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ARHGAP42A6NI28 874 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 DFFAO00273 331 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 EEF2KO00418 725 aaKnown RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 TRAFD1O14545 582 aaPredicted RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 TNFRSF10CO14798 259 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 SUV39H1O43463 412 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 FGF1P05230 155 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 AK4P27144 223 aaPredicted RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 CSNK1DP48730 415 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 BCL2L1Q07817 233 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ACOX1Q15067 660 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 SYCP1Q15431 976 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 AFMIDQ63HM1 303 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 PNCKQ6P2M8 343 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ATG14Q6ZNE5 492 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 HEATR4Q86WZ0 1026 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ARFGAP1Q8N6T3 406 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 PAF1Q8N7H5 531 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 GPBAR1Q8TDU6 330 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 ZDHHC1Q8WTX9 485 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 CCDC74BQ96LY2 380 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 COQ10AQ96MF6 247 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
LINC00544-201ENST00000400540 DHX35Q9H5Z1 703 aaKnown RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 CARS2Q9HA77 564 aaKnown RBP11.94□□□□□ -0.5
LINC00544-201ENST00000400540 SP110Q9HB58 689 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms