RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 POLBP06746 335 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 SLC1A2P43004 574 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 RBM20Q5T481 1227 aaKnown RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 CDHR3Q6ZTQ4 885 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 STRA8Q7Z7C7 330 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TTC7BQ86TV6 843 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TMEM135Q86UB9 458 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 ZNF513Q8N8E2 541 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PAIP2Q9BPZ3 127 aaKnown RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 SOX13Q9UN79 622 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 KLHL33A6NCF5 533 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 PHGDHO43175 533 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 GOT2P00505 430 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 ITGB6P18564 788 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 CTHP32929 405 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 PSMD8P48556 350 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 PSAPL1Q6NUJ1 521 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 ATP6V1G3Q96LB4 118 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 VIPAS39Q9H9C1 493 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 VPS45Q9NRW7 570 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 MOCS1Q9NZB8 636 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 MTO1Q9Y2Z2 717 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 PGLSO95336 258 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 AHSGP02765 367 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 POU2F2P09086 479 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 PFKLP17858 780 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 COL9A1P20849 921 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 ARCN1P48444 511 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 IRF9Q00978 393 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 PCID2Q5JVF3 399 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 C9orf64Q5T6V5 341 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 TEDDM1Q5T9Z0 273 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 PIM3Q86V86 326 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 CPA6Q8N4T0 437 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 TXNDC5Q8NBS9 432 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 PPHLN1Q8NEY8 458 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 GPR63Q9BZJ6 419 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 MKRN2Q9H000 416 aaKnown RBP11.72□□□□□ -0.53
SKA3-203ENST00000400018 SUV39H2Q9H5I1 410 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 LMCD1Q9NZU5 365 aa11.72□□□□□ -0.53
SKA3-203ENST00000400018 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 INHBAP08476 426 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 PYGBP11216 843 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 KRT4P19013 534 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 PLK1P53350 603 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 CSE1LP55060 971 aaKnown RBP11.71□□□□□ -0.53
SKA3-203ENST00000400018 SNRPD1P62314 119 aaKnown RBP11.71□□□□□ -0.53
SKA3-203ENST00000400018 TSTD2Q5T7W7 516 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 LRRC66Q68CR7 880 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 TTC17Q96AE7 1141 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 P2RY13Q9BPV8 354 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 BOCQ9BWV1 1114 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 CD320Q9NPF0 282 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 PCMTD2Q9NV79 361 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 GALPQ9UBC7 116 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 B4GALT6Q9UBX8 382 aa11.71□□□□□ -0.53
SKA3-203ENST00000400018 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.54
SKA3-203ENST00000400018 ST8SIA6P61647 398 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 CDK16Q00536 496 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 MTA1Q13330 715 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 COL19A1Q14993 1142 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 PDGFRLQ15198 375 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 ALG1LQ6GMV1 187 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 ZNF783Q6ZMS7 281 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.54
SKA3-203ENST00000400018 KIAA0907Q7Z7F0 614 aaPredicted RBP11.71□□□□□ -0.54
SKA3-203ENST00000400018 LINC00523Q86TU6 105 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 LRRC6Q86X45 466 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 RELL1Q8IUW5 271 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 SLC41A1Q8IVJ1 513 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.54
SKA3-203ENST00000400018 ARRDC3Q96B67 414 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 FEM1CQ96JP0 617 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 CYTH2Q99418 400 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 KIFC1Q9BW19 673 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 FOXQ1Q9C009 403 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 CD248Q9HCU0 757 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 EURLQ9NYK6 297 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 SLC17A7Q9P2U7 560 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.54
SKA3-203ENST00000400018 ANHXE9PGG2 379 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 FZD6O60353 706 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 PAPLNO95428 1278 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 MLNP12872 115 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 ETV3P41162 512 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
SKA3-203ENST00000400018 PRAMEP78395 509 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 GRM3Q14832 879 aa11.7□□□□□ -0.54
SKA3-203ENST00000400018 FBXO48Q5FWF7 155 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms