RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 CDK14O94921 469 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.13
USP47-203ENST00000399455 SMIM11AP58511 58 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 MRPL28Q13084 256 aaKnown RBP7.96□□□□□ -1.13
USP47-203ENST00000399455 MTM1Q13496 603 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 C1DQ13901 141 aaKnown RBP7.96□□□□□ -1.13
USP47-203ENST00000399455 ZACNQ401N2 412 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 UBXN11Q5T124 520 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 INPP5DQ92835 1189 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 RNF157Q96PX1 679 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TMEM245Q9H330 911 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TMEM120BA0PK00 339 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 A6NCN8 305 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 KLF8O95600 359 aaPredicted RBP7.96□□□□□ -1.13
USP47-203ENST00000399455 PSMC3P17980 439 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 SSR2P43308 183 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 PPP3CAQ08209 521 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TTC23Q5W5X9 447 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 NIPAL1Q6NVV3 410 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 GDPD4Q6W3E5 623 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TMEM26Q6ZUK4 368 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 POLNQ7Z5Q5 900 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 FAM71AQ8IYT1 594 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TMEM125Q96AQ2 219 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 TPD52L3Q96J77 140 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 NECTIN3Q9NQS3 549 aa7.96□□□□□ -1.13
USP47-203ENST00000399455 SPEF2Q9C093 1822 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 PRLRP16471 622 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 NR1D2Q14995 579 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 RFWD3Q6PCD5 774 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 CERS6Q6ZMG9 384 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 OR5B17Q8NGF7 314 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 AUTS2Q8WXX7 1259 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 KLHDC7BQ96G42 594 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 RERGLQ9H628 205 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 NOP53Q9NZM5 478 aaKnown RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 V9GYQ6 96 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 C5orf60A6NFR6 353 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 TISP43B9A030 160 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 TMEM150CB9EJG8 249 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 MAGEA10P43363 369 aaPredicted RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 PRKAG1P54619 331 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 IL10RBQ08334 325 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 C16orf87Q6PH81 154 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 MACC1Q6ZN28 852 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 ZNF621Q6ZSS3 439 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 SLC41A1Q8IVJ1 513 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 CFAP206Q8IYR0 622 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 OR52K1Q8NGK4 314 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 STYXQ8WUJ0 223 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 ART5Q96L15 291 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 PACSIN1Q9BY11 444 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 LDAHQ9H6V9 325 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 ETNK1Q9HBU6 452 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 SGK2Q9HBY8 427 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 CCDC177Q9NQR7 707 aaPredicted RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 GDF3Q9NR23 364 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 DMTF1Q9Y222 760 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 TMEM191CA6NGB0 347 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 H3BQF6 201 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 SEC24DO94855 1032 aaPredicted RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 PLGP00747 810 aaPredicted RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 SPATA31C1P0DKV0 1188 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 ME2P23368 584 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 ALDH4A1P30038 563 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 SOX11P35716 441 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 CSKP41240 450 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 CRATP43155 626 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 SLC1A6P48664 564 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 MINDY4Q4G0A6 757 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 POTEHQ6S545 545 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 AGGF1Q8N302 714 aaeCLIP7.96□□□□□ -1.14
USP47-203ENST00000399455 SPPL2AQ8TCT8 520 aa7.96□□□□□ -1.14
USP47-203ENST00000399455 USP15Q9Y4E8 981 aaPredicted RBP7.96□□□□□ -1.14
USP47-203ENST00000399455 A0A096LPK6 155 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 KLRG2A4D1S0 409 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 WFS1O76024 890 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CCNCP24863 283 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ITPKBP27987 946 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CCKBRP32239 447 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 TTLQ8NG68 377 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 TRIB2Q92519 343 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 MAGEB18Q96M61 343 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 VIPAS39Q9H9C1 493 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 PALMDQ9NP74 551 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 MRPS30Q9NP92 439 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 OSGEPQ9NPF4 335 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CNTN3Q9P232 1028 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 C15orf38-AP3S2A0A0A6YYH1 394 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 APOA1P02647 267 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 TCN1P20061 433 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 BMPR1AP36894 532 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAM180AQ6UWF9 173 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ARPINQ7Z6K5 226 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ELMO3Q96BJ8 720 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 LINGO1Q96FE5 620 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NSL1Q96IY1 281 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ZNF607Q96SK3 696 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CHD4Q14839 1912 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAM221BA6H8Z2 402 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms