RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 ZNF655Q8N720 491 aaPredicted RBP11.82□□□□□ -0.52
TMF1-201ENST00000398559 CXorf40AQ8TE69 158 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 WDR55Q9H6Y2 383 aaPredicted RBP11.82□□□□□ -0.52
TMF1-201ENST00000398559 DNMT3LQ9UJW3 386 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 CCDC189A1A4V9 331 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 SLC28A2O43868 658 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 NRP2O60462 931 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 UGT2B11O75310 529 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 C9P02748 559 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 TCF4P15884 667 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 SLC6A2P23975 617 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 ADCYAP1R1P41586 468 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 RBBP4Q09028 425 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 FAM83AQ86UY5 434 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 TBC1D21Q8IYX1 336 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 ELL3Q9HB65 397 aaPredicted RBP11.82□□□□□ -0.52
TMF1-201ENST00000398559 TRNAU1APQ9NX07 287 aaKnown RBP11.82□□□□□ -0.52
TMF1-201ENST00000398559 NCKAP1Q9Y2A7 1128 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 RWDD3Q9Y3V2 267 aa11.82□□□□□ -0.52
TMF1-201ENST00000398559 BBIP1A8MTZ0 92 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 LGALS2P05162 132 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ITGA3P26006 1051 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 RAPSNQ13702 412 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 FAM171BQ6P995 826 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SLC34A3Q8N130 599 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 HDAC10Q969S8 669 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CLIP3Q96DZ5 547 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 HSFY1Q96LI6 401 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 HOPXQ9BPY8 73 aaPredicted RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 TM6SF2Q9BZW4 377 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 PRDM8Q9NQV8 689 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CDH22Q9UJ99 828 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 FADS3Q9Y5Q0 445 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SCAMP3O14828 347 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 CASKO14936 926 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 TBL1XO60907 577 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SCNN1GP51170 649 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 BHLHB9Q6PI77 547 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CCDC80Q76M96 950 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ADAMTSL2Q86TH1 951 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 DSELQ8IZU8 1212 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 OR4L1Q8NH43 312 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SHC3Q92529 594 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 FAM210AQ96ND0 272 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CIB1Q99828 191 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 C2orf49Q9BVC5 232 aaPredicted RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 ABCA9Q8IUA7 1624 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 AP3D1O14617 1153 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CTPS1P17812 591 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CDH13P55290 713 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 TAS2R41P59536 307 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 DLG2Q15700 870 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SWT1Q5T5J6 900 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 CRTC3Q6UUV7 619 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 PIGZQ86VD9 579 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 SCAIQ8N9R8 606 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 NKX2-3Q8TAU0 364 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 PLLPQ9Y342 182 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 RBMX2Q9Y388 322 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 NPEPPSL1A6NEC2 478 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 RGS20O76081 388 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 CRHR1P34998 444 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 RAET1GQ6H3X3 334 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 TRIM40Q6P9F5 258 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ADCY4Q8NFM4 1077 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 INPP4AQ96PE3 977 aaPredicted RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 C1QTNF7Q9BXJ2 289 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 TIMMDC1Q9NPL8 285 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 REXO2Q9Y3B8 237 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 PPP2R3BQ9Y5P8 575 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 GRIN3BO60391 1043 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 RALGDSQ12967 914 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 KLF10Q13118 480 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 LDLRAP1Q5SW96 308 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ANXA8L1Q5VT79 327 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 EGFLAMQ63HQ2 1017 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 KIAA0319LQ8IZA0 1049 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ANKRD52Q8NB46 1076 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 WDR18Q9BV38 432 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 NMUR2Q9GZQ4 415 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ATP13A3Q9H7F0 1226 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 ACSS2Q9NR19 701 aa11.81□□□□□ -0.52
TMF1-201ENST00000398559 GNEQ9Y223 722 aaKnown RBP11.81□□□□□ -0.52
TMF1-201ENST00000398559 OR10H2O60403 315 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 LLGL2Q6P1M3 1020 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 NEK5Q6P3R8 708 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 CLNKQ7Z7G1 428 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 PPP1R16AQ96I34 528 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 ZNF607Q96SK3 696 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 ADAM2Q99965 735 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 BRD9Q9H8M2 597 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 DPP7Q9UHL4 492 aa11.8□□□□□ -0.52
TMF1-201ENST00000398559 FBXO5Q9UKT4 447 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms