RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MS4A2Q01362 244 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 GLB1LQ6UWU2 654 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PDSS2Q86YH6 399 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 IRGQQ8WZA9 623 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PSMG2Q969U7 264 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FAR2Q96K12 515 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ACOX2Q99424 681 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 ZBTB18Q99592 522 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 DCUN1D5Q9BTE7 237 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 C1orf50Q9BV19 199 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 KIFC1Q9BW19 673 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 LIN28AQ9H9Z2 209 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 HS3ST4Q9Y661 456 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 LTBP3Q9NS15 1303 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RBM47A0AV96 593 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 NPEPPSL1A6NEC2 478 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 AURKAO14965 403 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 RNASEH2AO75792 299 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 LBPP18428 481 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 FBXW4P57775 412 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 POU4F1Q01851 419 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 TTC33Q6PID6 262 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 PIM3Q86V86 326 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 TAGAPQ8N103 731 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 OR7D4Q8NG98 312 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 EPYCQ99645 322 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 INTS10Q9NVR2 710 aaKnown RBP4.95□□□□□ -1.62
SMAD4-202ENST00000398417 SMPD4Q9NXE4 827 aa4.95□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC189A1A4V9 331 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ENPP3O14638 875 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MTHFD1P11586 935 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 VCLP18206 1134 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GABRB3P28472 473 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MLLT1Q03111 559 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PRKCQQ04759 706 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SPRYD7Q5W111 196 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 FRA10AC1Q70Z53 315 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 LSMEM2Q8N112 164 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CFAP52Q8N1V2 620 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 FBXO39Q8N4B4 442 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 OR10T2Q8NGX3 314 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GATA6Q92908 595 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 KCTD14Q9BQ13 255 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 YIPF4Q9BSR8 244 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ABCG8Q9H221 673 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GID8Q9NWU2 228 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 H3BSA7 217 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 AZIN1O14977 448 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RAMP2O60895 175 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 IPO13O94829 963 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MT-ND1P03886 318 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CKMT2P17540 419 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 UGT1A6P19224 532 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CES1P23141 567 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 HMOX2P30519 316 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GRIA3P42263 894 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RPL5P46777 297 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 HSPA13P48723 471 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CDH15P55291 814 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RAD51Q06609 339 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF423Q2M1K9 1284 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 METTL21CQ5VZV1 264 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SIDT2Q8NBJ9 832 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RSPH1Q8WYR4 309 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MTFMTQ96DP5 389 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 OMA1Q96E52 524 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CIB1Q99828 191 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 C17orf80Q9BSJ5 609 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC90BQ9GZT6 254 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 NMUR1Q9HB89 426 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 STK39Q9UEW8 545 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TRAF6Q9Y4K3 522 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ARL5AQ9Y689 179 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 UBXN8O00124 270 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PFDN6O15212 129 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 NPHS1O60500 1241 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 F2P00734 622 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SLC35E2BP0CK96 405 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 COL6A2P12110 1019 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MYL4P12829 197 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 HGFP14210 728 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF23P17027 643 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CTPS1P17812 591 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DNAJB2P25686 324 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CDKL1Q00532 357 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GK3PQ14409 553 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GRB14Q14449 540 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 FAM117BQ6P1L5 589 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DCLRE1AQ6PJP8 1040 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 OR9I1Q8NGQ6 314 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DDI1Q8WTU0 396 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TRIM62Q9BVG3 475 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MUC3BQ9H195 1237 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 NOL11Q9H8H0 719 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.94□□□□□ -1.626e-6■□□□□ 8.3
SMAD4-202ENST00000398417 ZNF232Q9UNY5 417 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DOCK8Q8NF50 2099 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 H0Y626 953 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms