RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 COL12A1Q99715 3063 aa6.54□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ATMQ13315 3056 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 A0A087WV48 116 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 A0A0A0MRY4 1105 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SLC12A8A0AV02 714 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TBC1D3BA6NDS4 549 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 C3orf70A6NLC5 250 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CCT8L1PA6NM43 557 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 NEDD8-MDP1E9PL57 170 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SGK1O00141 431 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PIK3R2O00459 728 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TRIM24O15164 1050 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DIAPH2O60879 1101 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 LRCH4O75427 683 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SPAG6O75602 509 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 STC2O76061 302 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ZBED1O96006 694 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CALCAP01258 141 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 KLKB1P03952 638 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SHBGP04278 402 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TYRP14679 529 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 HNRNPLP14866 589 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 KDELR1P24390 212 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ITPKBP27987 946 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PHBP35232 272 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PTGER3P43115 390 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TNFRSF4P43489 277 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 KIR2DL1P43626 348 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 RPL34P49207 117 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 RGS7P49802 495 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DGKEP52429 567 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ZNF143P52747 638 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 YWHAGP61981 247 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 COG7P83436 770 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 OGDHQ02218 1023 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CYP4F3Q08477 520 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ADIGQ0VDE8 80 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 BST2Q10589 180 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ITGA9Q13797 1035 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CRY1Q16526 586 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ZNF423Q2M1K9 1284 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PKDCCQ504Y2 493 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 RNASEH2BQ5TBB1 312 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PM20D1Q6GTS8 502 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 GRAMD4Q6IC98 578 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DENND1BQ6P3S1 775 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 MFSD7Q6UXD7 560 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PPP1R21Q6ZMI0 780 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ARHGEF18Q6ZSZ5 1173 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CENPUQ71F23 418 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 GSTA5Q7RTV2 222 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 MAP7D3Q8IWC1 876 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 IL17RCQ8NAC3 791 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TSTD1Q8NFU3 115 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 GDAP1Q8TB36 358 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PIP4K2CQ8TBX8 421 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DQX1Q8TE96 717 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 RLN3Q8WXF3 142 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ADAMTS14Q8WXS8 1223 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ATG4AQ8WYN0 398 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 RAPGEF5Q92565 580 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 GRAMD1AQ96CP6 724 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 HIC2Q96JB3 615 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ZNF317Q96PQ6 595 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 NR1H4Q96RI1 486 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TUBGCP5Q96RT8 1024 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CDK5RAP1Q96SZ6 601 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 CNPY3Q9BT09 278 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 OSBPL10Q9BXB5 764 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 BBS2Q9BXC9 721 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 EPB41L1Q9H4G0 881 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 INTS9Q9NV88 658 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DNAJC17Q9NVM6 304 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 EURLQ9NYK6 297 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 NINJ2Q9NZG7 142 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 MARK1Q9P0L2 795 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 MARCH2Q9P0N8 246 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 DEC1Q9P2X7 70 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 EBF1Q9UH73 591 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 EVLQ9UI08 416 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SLC24A2Q9UI40 661 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 TSR3Q9UJK0 312 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 SATB2Q9UPW6 733 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 PCDH15Q96QU1 1955 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 ACACAQ13085 2346 aa6.53□□□□□ -1.36
SMARCE1P6-201ENST00000398372 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MAGEA13PA6NCF6 341 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 C2CD4BA6NLJ0 364 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 E7ESA3 106 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 M0QYV0 167 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MCF2LO15068 1137 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ALOX15BO15296 676 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SH3BP5O60239 455 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CACNG3O60359 315 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ADAM23O75077 832 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ATP5HO75947 161 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms