RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 FUNDC2Q9BWH2 189 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 KIAA1257Q9ULG3 409 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 TBX22Q9Y458 520 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ARHGDIBP52566 201 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 GAS6Q14393 721 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 C2orf76Q3KRA6 126 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 LDLRAP1Q5SW96 308 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ZCCHC12Q6PEW1 402 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 KLHDC10Q6PID8 442 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ELMOD1Q8N336 334 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 SLC13A3Q8WWT9 602 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 NKRFO15226 690 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PLOD3O60568 738 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 RTN2O75298 545 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 YWHAQP27348 245 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 RAD52P43351 418 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 MLIPQ5VWP3 458 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 DHDDSQ86SQ9 333 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 SFRP1Q8N474 314 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 NUAK1O60285 661 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 FAM20BO75063 409 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 LARGE1O95461 756 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 LINGO3P0C6S8 592 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 SLC2A1P11166 492 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PHKG2P15735 406 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 TLE4Q04727 773 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 FAM69AQ5T7M9 428 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 OR2D3Q8NGH3 330 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 TADA1Q96BN2 335 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 NT5C1BQ96P26 610 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PLSCR2Q9NRY7 297 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF888P0CJ79 500 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 EDN3P14138 238 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 GSTM4Q03013 218 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 NDUFA9Q16795 377 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 CLEC12AQ5QGZ9 265 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ALDH16A1Q8IZ83 802 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 TTLQ8NG68 377 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 UBTD2Q8WUN7 234 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 CD109Q6YHK3 1445 aa12.83□□□□□ -0.35
CCBE1-201ENST00000398179 DFNA5O60443 496 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 LPXNO60711 386 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ALX3O95076 343 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 LGI1O95970 557 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 HIBADHP31937 336 aaKnown RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 CBFBQ13951 182 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 CDNFQ49AH0 187 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 PCYOX1LQ8NBM8 494 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 MOCOSQ96EN8 888 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 GON7Q9BXV9 100 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ARNT2Q9HBZ2 717 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 PAQR5Q9NXK6 330 aaPredicted RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ATG13O75143 517 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 RFX4Q33E94 735 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 PAGE2BQ5JRK9 111 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 LPCAT4Q643R3 524 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 DPY19L3Q6ZPD9 716 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 RDM1Q8NG50 284 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 LARP4BQ92615 738 aaKnown RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 TMA16Q96EY4 203 aaKnown RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ARHGEF4Q9NR80 690 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ATP8A2Q9NTI2 1148 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 PTCH2Q9Y6C5 1203 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 MEIS1O00470 390 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 SLC25A17O43808 307 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 SEC13P55735 322 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 IL2P60568 153 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 RPA4Q13156 261 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 C4orf17Q53FE4 359 aa12.83□□□□□ -0.36
CCBE1-201ENST00000398179 INTS5Q6P9B9 1019 aaKnown RBP12.83□□□□□ -0.36
CCBE1-201ENST00000398179 ZNF517Q6ZMY9 492 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms