RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SHBQ15464 509 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 PRAMEF14Q5SWL7 426 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 ITPRIPL1Q6GPH6 555 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 PRPF39Q86UA1 669 aaKnown RBP25.57■■□□□ 1.68
U2AF1-203ENST00000398137 SPATA22Q8NHS9 363 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 SETD7Q8WTS6 366 aaKnown RBP25.57■■□□□ 1.68
U2AF1-203ENST00000398137 ZNF592Q92610 1267 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 ECHDC3Q96DC8 303 aa25.57■■□□□ 1.68
U2AF1-203ENST00000398137 GOLGA6L10A0A0M3HER8 536 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 SLC7A4O43246 635 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 HTRA2O43464 458 aaPredicted RBP25.56■■□□□ 1.68
U2AF1-203ENST00000398137 KCNJ1P48048 391 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 IL9RQ01113 521 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 BRAT1Q6PJG6 821 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 ARHGEF18Q6ZSZ5 1173 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 ADAMTS14Q8WXS8 1223 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 MAGOHBQ96A72 148 aaKnown RBP25.56■■□□□ 1.68
U2AF1-203ENST00000398137 RTP4Q96DX8 246 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 TDRD1Q9BXT4 1180 aaKnown RBP25.56■■□□□ 1.68
U2AF1-203ENST00000398137 UBP1Q9NZI7 540 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 MSRB2Q9Y3D2 182 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 PCDHB9Q9Y5E1 797 aa25.56■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3DA0A087WVF3 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3IA0A087WXS9 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3EA0A087X179 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3KA0A087X1G2 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3FA6NER0 549 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3LB9A6J9 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 PDE2AO00408 941 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 FLRT2O43155 660 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 PCDHGA12O60330 932 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 DKK1O94907 266 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TRIM16O95361 564 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 MT-CYBP00156 380 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 CPP00450 1065 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 IFNB1P01574 187 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 PRKCGP05129 697 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3HP0C7X1 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TIMP2P16035 220 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 XPAP23025 273 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 PSMB4P28070 264 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 CCDC15Q0P6D6 951 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 ARMC12Q5T9G4 340 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3GQ6DHY5 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3CQ6IPX1 549 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TTC27Q6P3X3 843 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 PRUNE1Q86TP1 453 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 TBC1D3Q8IZP1 549 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 KDF1Q8NAX2 398 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 OXNAD1Q96HP4 312 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-203ENST00000398137 FCRL5Q96RD9 977 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 KDM4CQ9H3R0 1056 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 CHKBQ9Y259 395 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 ITM2BQ9Y287 266 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 CFAP47Q6ZTR5 3102 aa25.55■■□□□ 1.68
U2AF1-203ENST00000398137 IGF2RP11717 2491 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 A0A1B0GTQ1 180 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 KIF2AO00139 706 aaPredicted RBP25.54■■□□□ 1.68
U2AF1-203ENST00000398137 SPINT1O43278 529 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 PHF2O75151 1096 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 PMPCBO75439 489 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 GCATO75600 419 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 PGLSO95336 258 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 CA4P22748 312 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 CD38P28907 300 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 STIP1P31948 543 aaKnown RBP25.54■■□□□ 1.68
U2AF1-203ENST00000398137 PCSK7Q16549 785 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 CYP1B1Q16678 543 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 TTC7BQ86TV6 843 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 TAB3Q8N5C8 712 aaPredicted RBP25.54■■□□□ 1.68
U2AF1-203ENST00000398137 CCDC89Q8N998 374 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 HCAR2Q8TDS4 363 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 RHBDD1Q8TEB9 315 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 TADA1Q96BN2 335 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 SERAC1Q96JX3 654 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 GORASP1Q9BQQ3 440 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 GGT7Q9UJ14 662 aa25.54■■□□□ 1.68
U2AF1-203ENST00000398137 DRG1Q9Y295 367 aaKnown RBP25.54■■□□□ 1.68
U2AF1-203ENST00000398137 PDHA1P08559 390 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 ATXN1LP0C7T5 689 aaKnown RBP25.53■■□□□ 1.68
U2AF1-203ENST00000398137 ETS1P14921 441 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 ITIH2P19823 946 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 MAT2AP31153 395 aaKnown RBP25.53■■□□□ 1.68
U2AF1-203ENST00000398137 DEKP35659 375 aaKnown RBP25.53■■□□□ 1.68
U2AF1-203ENST00000398137 PAFAH1B1P43034 410 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 CCT8P50990 548 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 SLC14A2Q15849 920 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 UGP2Q16851 508 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 KCTD19Q17RG1 926 aaPredicted RBP25.53■■□□□ 1.68
U2AF1-203ENST00000398137 P3H1Q32P28 736 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 GSTA5Q7RTV2 222 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 KDELC2Q7Z4H8 507 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 TRIM69Q86WT6 500 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 GLIS1Q8NBF1 620 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 RAB7BQ96AH8 199 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 PCDH9Q9HC56 1237 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 PCDH12Q9NPG4 1184 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 AASDHPPTQ9NRN7 309 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 FAM153AQ9UHL3 310 aa25.53■■□□□ 1.68
U2AF1-203ENST00000398137 FADS3Q9Y5Q0 445 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms