RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RANBP9Q96S59 729 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SEMA3CQ99985 751 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ALG9Q9H6U8 611 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ACTL7AQ9Y615 435 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 COMMD3-BMI1R4GMX3 469 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MROH6A6NGR9 719 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SLC4A1P02730 911 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 C1QTNF8P60827 252 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CFAP52Q8N1V2 620 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 BLOC1S5Q8TDH9 187 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TMA16Q96EY4 203 aaKnown RBP18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MAELQ96JY0 434 aaKnown RBP18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 UBXN10Q96LJ8 280 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CCSER2Q9H7U1 834 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ARL5AQ9Y689 179 aa18.41■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TMEM189-UBE2V1I3L0A0 370 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 LDB2O43679 373 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 S1PR4O95977 384 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CST5P28325 142 aaPredicted RBP18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GATMP50440 423 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CBX3Q13185 183 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ART3Q13508 389 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CEACAM7Q14002 265 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GALNT3Q14435 633 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TRIP4Q15650 581 aaPredicted RBP18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PPP1R3AQ16821 1122 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KLC3Q6P597 504 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 GK5Q6ZS86 529 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TEX26Q8N6G2 289 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CEP70Q8NHQ1 597 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 KLHL4Q9C0H6 718 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 WDR41Q9HAD4 459 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RNF186Q9NXI6 227 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PRPF19Q9UMS4 504 aaKnown RBP18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PLXNA3P51805 1871 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 TRPC5OSA6NMA1 111 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MT-CO1P00395 513 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 LYNP07948 512 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 MS4A2Q01362 244 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 ZNF423Q2M1K9 1284 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 PIGGQ5H8A4 983 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 RSPO2Q6UXX9 243 aaPredicted RBP18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 CUZD1Q86UP6 607 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SPPL2BQ8TCT7 592 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 SERPINI1Q99574 410 aa18.4■□□□□ 0.54
CHRFAM7A-202ENST00000397827 FRMPD3Q5JV73 1810 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TCAF2A6NFQ2 919 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC7A4O43246 635 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PAPSS2O95340 614 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TCN1P20061 433 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FUT4P22083 530 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PBX3P40426 434 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SERINC3Q13530 473 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FLOT2Q14254 428 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SETD3Q86TU7 594 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAM156AQ8NDB6 213 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OR52K2Q8NGK3 314 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 EXT2Q93063 718 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ABTB1Q969K4 478 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TUBGCP5Q96RT8 1024 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MFSD1Q9H3U5 465 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SQORQ9Y6N5 450 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC22A2O15244 555 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TPD52L2O43399 206 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HNRNPCP07910 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MRPS22P82650 360 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ACAP2Q15057 778 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GSTA3Q16772 222 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 LIN52Q52LA3 116 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IL31Q6EBC2 164 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 NADSYN1Q6IA69 706 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RYBPQ8N488 228 aaPredicted RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PPP2R3CQ969Q6 453 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TSPAN17Q96FV3 270 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 DNAJC1Q96KC8 554 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 EFCAB1Q9HAE3 211 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TLR8Q9NR97 1041 aaKnown RBP18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IL37Q9NZH6 218 aa18.39■□□□□ 0.53
CHRFAM7A-202ENST00000397827 A0A0D9SEW6 157 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 LOC285095A0A1B0GVY8 99 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 NT5C1B-RDH14C9J2C7 533 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RBP1P09455 135 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 KCNQ1P51787 676 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IL10RBQ08334 325 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GRAMD1BQ3KR37 738 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CLEC6AQ6EIG7 209 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RNF180Q86T96 592 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PGAM4Q8N0Y7 254 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ARL10Q8N8L6 244 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OR13C4Q8NGS5 318 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GABPB2Q8TAK5 448 aaPredicted RBP18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HSFX1Q9UBD0 423 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAM92AA1XBS5 289 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TMEM221A6NGB7 291 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 DRGXA6NNA5 263 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 UBFD1O14562 309 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms