RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CHRAC1Q9NRG0 131 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 KIF26AQ9ULI4 1882 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TCRBV9S1A1TA0A576 114 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 KLF11O14901 512 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TIMM44O43615 452 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 BNIP3LO60238 219 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 GSRP00390 522 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PRLP01236 227 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 FGF1P05230 155 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 POLBP06746 335 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 ADRA1DP25100 572 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 EIF2DP41214 584 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 VASPP50552 380 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 E2F5Q15329 346 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PTPRNQ16849 979 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 CARD16Q5EG05 197 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 LGSNQ5TDP6 509 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TLDC1Q6P9B6 456 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 CES3Q6UWW8 571 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 SH2D5Q6ZV89 423 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 KIF2BQ8N4N8 673 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TERB1Q8NA31 727 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 CSGALNACT1Q8TDX6 532 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 CHFRQ96EP1 664 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 LIMD1Q9UGP4 676 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 SOX13Q9UN79 622 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PLA2G4CQ9UP65 541 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 RPS6KL1Q9Y6S9 549 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 BRWD1Q9NSI6 2320 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TBC1D3BA6NDS4 549 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PDHA1P08559 390 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 ETV4P43268 484 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 ST8SIA6P61647 398 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 BCL2L1Q07817 233 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 EIF4HQ15056 248 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 MYLK3Q32MK0 819 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 Q6ZVU0 165 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 NLRP9Q7RTR0 991 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 SLC26A11Q86WA9 606 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 CAMK1DQ8IU85 385 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PLCD3Q8N3E9 789 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 PDCD6IPQ8WUM4 868 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 MYO19Q96H55 970 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 KIFC1Q9BW19 673 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 TRIM55Q9BYV6 548 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 MKS1Q9NXB0 559 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 SLC8A2Q9UPR5 921 aa19.41■□□□□ 0.7
PDLIM2-204ENST00000397760 FAM237BA0A1B0GVD1 139 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 TTC34A8MYJ7 566 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 GKP32189 559 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 MSLNQ13421 630 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 CRYMQ14894 314 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 PKN3Q6P5Z2 889 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 TMEM135Q86UB9 458 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 SFTPA1Q8IWL2 248 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 TRIM42Q8IWZ5 723 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 PPHLN1Q8NEY8 458 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 FRS2Q8WU20 508 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 RMDN1Q96DB5 314 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 MRRFQ96E11 262 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 RSRC1Q96IZ7 334 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 ADGRE3Q9BY15 652 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 ATP13A3Q9H7F0 1226 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 C15orf41Q9Y2V0 281 aa19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 SPTBN5Q9NRC6 3674 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-204ENST00000397760 DNAJC6O75061 913 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 USP1O94782 785 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 PIGNO95427 931 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 PRKCHP24723 683 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 RECQLP46063 649 aaPredicted RBP19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 SOX9P48436 509 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 CCNHP51946 323 aaPredicted RBP19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 SEPT6Q14141 434 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 ANKRD20A4Q4UJ75 823 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 SPANXN3Q5MJ09 141 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 DPY19L3Q6ZPD9 716 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 PLPP6Q8IY26 295 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 LPCAT1Q8NF37 534 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 ZNF669Q96BR6 464 aaPredicted RBP19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 FCRL3Q96P31 734 aaPredicted RBP19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 KCNK12Q9HB15 430 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 ZFP69BQ9UJL9 534 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 STK38LQ9Y2H1 464 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 MTO1Q9Y2Z2 717 aaKnown RBP19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 TCAF1Q9Y4C2 921 aa19.39■□□□□ 0.7
PDLIM2-204ENST00000397760 EYSQ5T1H1 3165 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 FZD6O60353 706 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 KRT37O76014 449 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 KAT7O95251 611 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 ANP32DO95626 131 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 POP4O95707 220 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 T-ENOLP0DO92 83 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 PTPN4P29074 926 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 GRIA2P42262 883 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 RAD51Q06609 339 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 SMAD2Q15796 467 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 KBTBD12Q3ZCT8 623 aa19.39■□□□□ 0.69
PDLIM2-204ENST00000397760 ARMC12Q5T9G4 340 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms