RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 PPM1HQ9ULR3 514 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CEP290O15078 2479 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CLUHO75153 1309 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 SMIM28A0A1B0GU29 152 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CCDC189A1A4V9 331 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 BCLAF3A2AJT9 711 aaKnown RBP10.79□□□□□ -0.68
CCDC40-204ENST00000397545 LRG1P02750 347 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ARL2P36404 184 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 OGDHQ02218 1023 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TRAF3Q13114 568 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CARTPTQ16568 116 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 DGUOKQ16854 277 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 RGS21Q2M5E4 152 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 STRADAQ7RTN6 431 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TAS1R3Q7RTX0 852 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ADHFE1Q8IWW8 467 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CBR4Q8N4T8 237 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 PSMA8Q8TAA3 256 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 GPR20Q99678 358 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 NDEL1Q9GZM8 345 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 NUAK2Q9H093 628 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 EPB41L1Q9H4G0 881 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 REEP1Q9H902 201 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 PDZK1P1A8MUH7 402 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 RGS14O43566 566 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ITM2AO43736 263 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ULK1O75385 1050 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CST1P01037 141 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 FGFR1P11362 822 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TPSB2P20231 275 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ECHS1P30084 290 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 IRF8Q02556 426 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TPSAB1Q15661 275 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 FSCN1Q16658 493 aaKnown RBP10.79□□□□□ -0.68
CCDC40-204ENST00000397545 CEP78Q5JTW2 689 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 BROXQ5VW32 411 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TPGS1Q6ZTW0 290 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 FAM9CQ8IZT9 166 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ADCY4Q8NFM4 1077 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 OR6K2Q8NGY2 324 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ELMO1Q92556 727 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 ASB2Q96Q27 587 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TWNKQ96RR1 684 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TUBGCP5Q96RT8 1024 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 PCDHAC1Q9H158 963 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 DTLQ9NZJ0 730 aa10.79□□□□□ -0.68
CCDC40-204ENST00000397545 SLC15A5A6NIM6 579 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PAGE1O75459 146 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SERPINI2O75830 405 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 GSNP06396 782 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SMIM10L2AP0DMW4 78 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CTPS1P17812 591 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 DDX5P17844 614 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TYMPP19971 482 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NMBRP28336 390 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ADSLP30566 484 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 POLD2P49005 469 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 GPX6P59796 221 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NCF4Q15080 339 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 C9orf57Q5W0N0 161 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 RHBDF2Q6PJF5 856 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 POTEHQ6S545 545 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 DET1Q7L5Y6 550 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TRMT11Q7Z4G4 463 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM132CQ8N3T6 1108 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NAT8LQ8N9F0 302 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ACTRT2Q8TDY3 377 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 UBASH3BQ8TF42 649 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 LRTOMTQ8WZ04 291 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TRMUO75648 421 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 OR4Q2P0C623 313 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CKMT2P17540 419 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 LMO2P25791 158 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PSEN1P49768 467 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TAS2R39P59534 338 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TNK2Q07912 1038 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ANGPT1Q15389 498 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 INAQ16352 499 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ANO7Q6IWH7 933 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 GPRIN3Q6ZVF9 776 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM86AQ8N2M4 240 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 FSTL5Q8N475 847 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 LRRC52Q8N7C0 313 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 FAM45AQ8TCE6 357 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 MCOLN3Q8TDD5 553 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TBATAQ96M53 351 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NTPCRQ9BSD7 190 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PLGRKTQ9HBL7 147 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ATAD3AQ9NVI7 634 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PIPSLA2A3N6 862 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 STX16-NPEPL1H3BU86 382 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 RECQL5O94762 991 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms