RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RAB6AP20340 208 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 HNRNPA2B1P22626 353 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 TCEA1P23193 301 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 PTGS1P23219 599 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 PSMA5P28066 241 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CCND2P30279 289 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 UCP2P55851 309 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 NUCB2P80303 420 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC173Q0VFZ6 552 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 RUNX2Q13950 521 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SQLEQ14534 574 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ELOA3BQ3SY89 546 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC152Q4G0S7 254 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 PABPC1LQ4VXU2 614 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 TDRD12Q587J7 1177 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ATAD3BQ5T9A4 648 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CACHD1Q5VU97 1274 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SFMBT2Q5VUG0 894 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 HMBOX1Q6NT76 420 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 KLC3Q6P597 504 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 PSRC1Q6PGN9 363 aaPredicted RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 MTSS1LQ765P7 747 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC80Q76M96 950 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 USP37Q86T82 979 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 GAS2L3Q86XJ1 694 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SLC22A9Q8IVM8 553 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 UNC5BQ8IZJ1 945 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 KRT222Q8N1A0 295 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 AGBL3Q8NEM8 1001 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ELOA3Q8NG57 546 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF480Q8WV37 535 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SLAMF9Q96A28 289 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC51Q96ER9 411 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ABHD8Q96I13 439 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 LRIG1Q96JA1 1093 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 ATP6V1G3Q96LB4 118 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CAMK1GQ96NX5 476 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 MESP1Q9BRJ9 268 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 TRIM2Q9C040 744 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 DNAJC17Q9NVM6 304 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 GPRC5DQ9NZD1 345 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 DBR1Q9UK59 544 aaKnown RBP6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SLC45A2Q9UMX9 530 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 SNX6Q9UNH7 406 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 OSGIN2Q9Y236 505 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 CDY1Q9Y6F8 540 aa6.84□□□□□ -1.31
SMCO1-201ENST00000397537 TNRC18O15417 2968 aaPredicted RBP6.84□□□□□ -1.32
SMCO1-201ENST00000397537 LOC105369274A0A096LPK9 316 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 LOC102723532A0A0G2JNH3 316 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SSU72P8A0A1W2PR75 194 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PMS2P1A4D2B8 440 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MFSD2BA6NFX1 497 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 IFNL4K9M1U5 179 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 M0QYG6 137 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 BIN1O00499 593 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 YEATS4O95619 227 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ALBP02768 609 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PEPDP12955 493 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ADRA2CP18825 462 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ABCG1P45844 678 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 VCPP55072 806 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 NFIAQ12857 509 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 OVGP1Q12889 678 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 KCNC3Q14003 757 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SCARF1Q14162 830 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PDIA5Q14554 519 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 GAB4Q2WGN9 574 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF569Q5MCW4 686 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CES3Q6UWW8 571 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SYVN1Q86TM6 617 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CLYBLQ8N0X4 340 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 OR4N4Q8N0Y3 316 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 GALNT6Q8NCL4 622 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 DNERQ8NFT8 737 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CCDC26Q8TAB7 109 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MIPOL1Q8TD10 442 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ABHD5Q8WTS1 349 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ROBO4Q8WZ75 1007 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SYN2Q92777 582 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PEX13Q92968 403 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 RAD9AQ99638 391 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 RIOK1Q9BRS2 568 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 GPR61Q9BZJ8 451 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 HRH4Q9H3N8 390 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TFB2MQ9H5Q4 396 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 USP29Q9HBJ7 922 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SENP2Q9HC62 589 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MAGEL2Q9UJ55 1249 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CCPG1Q9ULG6 757 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 NUDCQ9Y266 331 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 DLGAP4Q9Y2H0 992 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PCDHB7Q9Y5E2 793 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PCDHB4Q9Y5E5 795 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MAP3K19Q56UN5 1328 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PDE4DIPQ5VU43 2346 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SERTM2A0A1B0GWG4 89 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms