RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CCINQ13939 588 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 STAT4Q14765 748 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 TAF1AQ15573 450 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-204ENST00000397443 HSP90AA5PQ58FG0 334 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 RASSF3Q86WH2 238 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 OR4K2Q8NGD2 314 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 OR13J1Q8NGT2 312 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 ARRDC3Q96B67 414 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 SUDS3Q9H7L9 328 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-204ENST00000397443 MAGEE1Q9HCI5 957 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 TBK1Q9UHD2 729 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 MAN2B1O00754 1011 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 RASGRF2O14827 1237 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UGT1A9O60656 530 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 TIMP2P16035 220 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 E2F5Q15329 346 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 DSG4Q86SJ6 1040 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 KCNMB4Q86W47 210 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 NDUFAF2Q8N183 169 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 TMIEQ8NEW7 156 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 OR6P1Q8NGX9 317 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 SCRN2Q96FV2 425 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 MSANTD3Q96H12 275 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UGT1A7Q9HAW7 530 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UGT1A10Q9HAW8 530 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UGT1A8Q9HAW9 530 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 MOCS1Q9NZB8 636 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 B4GALT6Q9UBX8 382 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 CKAP5Q14008 2032 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 KRBA1A5PL33 1030 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UPK3BL1B0FP48 263 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 UPK3BL2E5RIL1 263 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 CAMK2GQ13555 558 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-204ENST00000397443 STARD3Q14849 445 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 KLHL38Q2WGJ6 581 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 Q6ZS52 159 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 SIX5Q8N196 739 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 HDAC10Q969S8 669 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 EID2BQ96D98 161 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 TBATAQ96M53 351 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 SLC6A17Q9H1V8 727 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 ZFYVE1Q9HBF4 777 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 PCDH12Q9NPG4 1184 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 DYRK4Q9NR20 520 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 IARS2Q9NSE4 1012 aaKnown RBP21.23■□□□□ 0.99
CPNE1-204ENST00000397443 HACD3Q9P035 362 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 ZFATQ9P243 1243 aa21.23■□□□□ 0.99
CPNE1-204ENST00000397443 BCCIPQ9P287 314 aaKnown RBP eCLIP21.23■□□□□ 0.995e-7■■■□□ 17.8
CPNE1-204ENST00000397443 OR51F1A6NGY5 319 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 C19orf67A6NJJ6 358 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 STX7O15400 261 aaKnown RBP21.22■□□□□ 0.99
CPNE1-204ENST00000397443 FAM155BO75949 473 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 ALDH1A2O94788 518 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 PAMP19021 973 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 COL9A1P20849 921 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 LPOP22079 712 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-204ENST00000397443 ARNTP27540 789 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 ZNF140P52738 457 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-204ENST00000397443 PRAMEP78395 509 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 SATB1Q01826 763 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 UBXN2BQ14CS0 331 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 FBXL19Q6PCT2 694 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 CRTC1Q6UUV9 634 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 NLRP9Q7RTR0 991 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 TTC30BQ8N4P2 665 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 PAFAH2Q99487 392 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 AGAP2Q99490 1192 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 ITM2BQ9Y287 266 aa21.22■□□□□ 0.99
CPNE1-204ENST00000397443 MTF2Q9Y483 593 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-204ENST00000397443 C1QTNF3-AMACRE9PGA6 284 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 RNASEH1O60930 286 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 C1QAP02745 245 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 GCAP28676 217 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MRPS21P82921 87 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MGAT5Q09328 741 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 LAMB3Q13751 1172 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 LRRC66Q68CR7 880 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 TRMT11Q7Z4G4 463 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 PTAR1Q7Z6K3 402 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 OTUD6BQ8N6M0 293 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 GOLGA6L1Q8N7Z2 621 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 PNPLA1Q8N8W4 532 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 FLCNQ8NFG4 579 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 STYXQ8WUJ0 223 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 PPP1R16AQ96I34 528 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 GABRG3Q99928 467 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MUTYHQ9UIF7 546 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 A0A1W2PQ67 120 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 GOLGA6L10A6NI86 522 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 FAM159BA6NKW6 160 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MID1O15344 667 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 PAPSS2O95340 614 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 IVLP07476 585 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MYZAPP0CAP1 466 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 LHCGRP22888 699 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 ITGB7P26010 798 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 TARSP26639 723 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MSH2P43246 934 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 ARCN1P48444 511 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 FBXO43Q4G163 708 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms