RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PPM1HQ9ULR3 514 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 CKAP5Q14008 2032 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 A0A1W2PQ67 120 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 NPC1O15118 1278 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 EPHX1P07099 455 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 MSH2P43246 934 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 ZNF805Q5CZA5 627 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 TEDDM1Q5T9Z0 273 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 RASSF3Q86WH2 238 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 CHPFQ8IZ52 775 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 RIBC1Q8N443 379 aaPredicted RBP27.57■■■□□ 2
CPNE1-203ENST00000397442 PAF1Q8N7H5 531 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 STYXQ8WUJ0 223 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 OR8D1Q8WZ84 308 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 SCRN2Q96FV2 425 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 ATP6V1G3Q96LB4 118 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 TRABDQ9H4I3 376 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 PSMC3IPQ9P2W1 217 aaPredicted RBP27.57■■■□□ 2
CPNE1-203ENST00000397442 DKK3Q9UBP4 350 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 SUN2Q9UH99 717 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 TBK1Q9UHD2 729 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 GGT7Q9UJ14 662 aa27.57■■■□□ 2
CPNE1-203ENST00000397442 GOLGA8KD6RF30 607 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 GOLGA8TH3BQL2 631 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 CCL22O00626 93 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 RGS16O15492 202 aaPredicted RBP27.56■■■□□ 2
CPNE1-203ENST00000397442 FAM155BO75949 473 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 PAMP19021 973 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 TIE1P35590 1138 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 AGBL2Q5U5Z8 902 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 LYSMD3Q7Z3D4 306 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 SLC26A11Q86WA9 606 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 TMIEQ8NEW7 156 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 CDKL2Q92772 493 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 PKNOX2Q96KN3 472 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 AGAP2Q99490 1192 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 NLE1Q9NVX2 485 aaPredicted RBP27.56■■■□□ 2
CPNE1-203ENST00000397442 PSAT1Q9Y617 370 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 ATG2BQ96BY7 2078 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 NPIPB15A6NHN6 443 aaPredicted RBP27.56■■■□□ 2
CPNE1-203ENST00000397442 C2orf81A6NN90 581 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 PRNPP04156 253 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 DRD1P21728 446 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 LPOP22079 712 aaPredicted RBP27.56■■■□□ 2
CPNE1-203ENST00000397442 WASP42768 502 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 NAB1Q13506 487 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 SKIDA1Q1XH10 827 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 KCTD16Q68DU8 428 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 ADHFE1Q8IWW8 467 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 HCAR2Q8TDS4 363 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 ZFATQ9P243 1243 aa27.56■■■□□ 2
CPNE1-203ENST00000397442 METAP1P53582 386 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 POLR2LP62875 67 aaKnown RBP27.55■■■□□ 2
CPNE1-203ENST00000397442 E2F5Q15329 346 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 UGP2Q16851 508 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 SLC44A4Q53GD3 710 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 OR4K2Q8NGD2 314 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 HDAC10Q969S8 669 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 TLCD1Q96CP7 247 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 TBATAQ96M53 351 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 POLR3BQ9NW08 1133 aaPredicted RBP27.55■■■□□ 2
CPNE1-203ENST00000397442 BCCIPQ9P287 314 aaKnown RBP eCLIP27.55■■■□□ 25e-7■■■□□ 17.8
CPNE1-203ENST00000397442 ZNF180Q9UJW8 692 aa27.55■■■□□ 2
CPNE1-203ENST00000397442 SLC7A4O43246 635 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 RNF40O75150 1001 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 INHBAP08476 426 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 TIMP2P16035 220 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 HMGCLP35914 325 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 TMPRSS15P98073 1019 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 ZP2Q05996 745 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 GRSF1Q12849 480 aaKnown RBP eCLIP27.54■■■□□ 23e-10■□□□□ 10.9
CPNE1-203ENST00000397442 POM121L1PQ3SYA9 428 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 LRRC73Q5JTD7 316 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 CNTN4Q8IWV2 1026 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 PIP4K2CQ8TBX8 421 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 KCNV2Q8TDN2 545 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 MSANTD3Q96H12 275 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 SRPK1Q96SB4 655 aaKnown RBP27.54■■■□□ 2
CPNE1-203ENST00000397442 SUDS3Q9H7L9 328 aaPredicted RBP27.54■■■□□ 2
CPNE1-203ENST00000397442 IARS2Q9NSE4 1012 aaKnown RBP27.54■■■□□ 2
CPNE1-203ENST00000397442 IL17CQ9P0M4 197 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 DUSP12Q9UNI6 340 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 SCN8AQ9UQD0 1980 aa27.54■■■□□ 2
CPNE1-203ENST00000397442 C16orf96A6NNT2 1141 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 FOXO6A8MYZ6 492 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 RPP40O75818 363 aaKnown RBP27.53■■■□□ 2
CPNE1-203ENST00000397442 SLC4A1P02730 911 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 CAMK2GQ13555 558 aaPredicted RBP27.53■■■□□ 2
CPNE1-203ENST00000397442 TMED2Q15363 201 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 C2orf27AQ580R0 203 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 CRTC1Q6UUV9 634 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 USP45Q70EL2 814 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 TSPAN33Q86UF1 283 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 CDKN2AIPNLQ96HQ2 116 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 GPR63Q9BZJ6 419 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 NOVA2Q9UNW9 492 aaKnown RBP27.53■■■□□ 2
CPNE1-203ENST00000397442 COL6A3P12111 3177 aa27.53■■■□□ 2
CPNE1-203ENST00000397442 C1orf232A0A0U1RR37 186 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 CLDN7O95471 211 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 OAS2P29728 719 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms