RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 POU6F1Q14863 301 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 TMEM52BQ4KMG9 183 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 USP39Q53GS9 565 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 DENND2CQ68D51 928 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 WDR5BQ86VZ2 330 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 FAM160A2Q8N612 972 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 FRMD1Q8N878 549 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 FBXO25Q8TCJ0 367 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 TOE1Q96GM8 510 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 PWWP2AQ96N64 755 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 WRAP53Q9BUR4 548 aaKnown RBP23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 BFARQ9NZS9 450 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 EML5Q05BV3 1969 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3DA0A087WVF3 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3IA0A087WXS9 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3EA0A087X179 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3KA0A087X1G2 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 C1orf232A0A0U1RR37 186 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3FA6NER0 549 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 PRR23AA6NEV1 266 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3LB9A6J9 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 SLC4A1P02730 911 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3HP0C7X1 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 LHCGRP22888 699 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 MGAT1P26572 445 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 HLTFQ14527 1009 aaKnown RBP eCLIP23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 LRRC66Q68CR7 880 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3GQ6DHY5 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3CQ6IPX1 549 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 LYSMD3Q7Z3D4 306 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 GLT6D1Q7Z4J2 308 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TBC1D3Q8IZP1 549 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 CXorf40AQ8TE69 158 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 SPACA7Q96KW9 195 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 GPR63Q9BZJ6 419 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 KDM4CQ9H3R0 1056 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 TRABDQ9H4I3 376 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 ANKZF1Q9H8Y5 726 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 PREBQ9HCU5 417 aa23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 WSB2Q9NYS7 404 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-203ENST00000397397 NUMA1Q14980 2115 aa23.64■■□□□ 1.38
TSPAN4-203ENST00000397397 LRRC72A6NJI9 287 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 CLDN7O95471 211 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 SEMA4FO95754 770 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 CARSP49589 748 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 LIG3P49916 1009 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 NUBP1P53384 320 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 ARL4CP56559 192 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 CUL1Q13616 776 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 SEPT6Q14141 434 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 CNGA3Q16281 694 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 HIF1AQ16665 826 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 CDKN3Q16667 212 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 ERCC6LQ2NKX8 1250 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 FNBP1LQ5T0N5 605 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 LONP2Q86WA8 852 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 PDIK1LQ8N165 341 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 ZCCHC9Q8N567 271 aaKnown RBP23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 OR2T34Q8NGX1 318 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 BRSK1Q8TDC3 778 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 PRRX2Q99811 253 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 FAM129AQ9BZQ8 928 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 ZFYVE1Q9HBF4 777 aa23.64■■□□□ 1.37
TSPAN4-203ENST00000397397 PLXND1Q9Y4D7 1925 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 AURKAO14965 403 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 MMP20O60882 483 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 RNGTTO60942 597 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 PPFIA2O75334 1257 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 ELFN1P0C7U0 828 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 ZNF30P17039 623 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 PLA2G5P39877 138 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 MAGEA3P43357 314 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 ANGPT1Q15389 498 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 BBS9Q3SYG4 887 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 DNAJC21Q5F1R6 531 aaKnown RBP23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 LIPIQ6XZB0 460 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 TTC30BQ8N4P2 665 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 GPR174Q9BXC1 333 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 IL22Q9GZX6 179 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 ZDHHC18Q9NUE0 388 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 SYBUQ9NX95 663 aa23.63■■□□□ 1.37
TSPAN4-203ENST00000397397 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.63■■□□□ 1.371e-6■■■■□ 22.7
TSPAN4-203ENST00000397397 SDR42E2A6NKP2 422 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 H0Y858 1186 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 NDUFS2O75306 463 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 CRTAMO95727 393 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 PTPN5P54829 565 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 CRADDP78560 199 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 NHLH1Q02575 133 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 TAF1AQ15573 450 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 CCDC38Q502W7 563 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 PPHLN1Q8NEY8 458 aaKnown RBP23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 FAM122AQ96E09 287 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 FAM126AQ9BYI3 521 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 MBD1Q9UIS9 605 aaPredicted RBP23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 ARL5AQ9Y689 179 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 LRRK1Q38SD2 2015 aa23.62■■□□□ 1.37
TSPAN4-203ENST00000397397 A0A1W2PQU0 124 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 C2orf81A6NN90 581 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 ADRA1DP25100 572 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms