RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 AGBL5Q8NDL9 886 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 WDR92Q96MX6 357 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 TBCBQ99426 244 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 NUDT22Q9BRQ3 303 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 APOOQ9BUR5 198 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 RUBCNLQ9H714 662 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 LUZP4Q9P127 313 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 KLQ9UEF7 1012 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 ZDHHC9Q9Y397 364 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 MFHAS1Q9Y4C4 1052 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 OAS3Q9Y6K5 1087 aaKnown RBP9.48□□□□□ -0.89
NEDD9-203ENST00000397378 HIVEP1P15822 2718 aa9.48□□□□□ -0.89
NEDD9-203ENST00000397378 BICDL2A1A5D9 508 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ZSCAN5CA6NGD5 496 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 SORBS2O94875 1100 aaKnown RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 TIMP2P16035 220 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ALDH4A1P30038 563 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 KRT9P35527 623 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 USP8P40818 1118 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 NOP2P46087 812 aaKnown RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 GABRB2P47870 512 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 RAB15P59190 212 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 RNASE9P60153 205 aaKnown RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 B4GALNT1Q00973 533 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ABHD18Q0P651 414 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ELP6Q0PNE2 266 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ERV3-1Q14264 604 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 INPP5AQ14642 412 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 LRRC73Q5JTD7 316 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 MANEALQ5VSG8 457 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 GJB7Q6PEY0 223 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 SFTPA2Q8IWL1 248 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 FAM46DQ8NEK8 389 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 PDXPQ96GD0 296 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 GDAP1L1Q96MZ0 367 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 WRAP53Q9BUR4 548 aaKnown RBP9.47□□□□□ -0.89
NEDD9-203ENST00000397378 TTYH3Q9C0H2 523 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 NDFIP2Q9NV92 336 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 TMEM248Q9NWD8 314 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 APEX2Q9UBZ4 518 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 POLHQ9Y253 713 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 COQ6Q9Y2Z9 468 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
NEDD9-203ENST00000397378 CROCCQ5TZA2 2017 aa9.46□□□□□ -0.89
NEDD9-203ENST00000397378 SVILO95425 2214 aa9.46□□□□□ -0.89
NEDD9-203ENST00000397378 TNFRSF10CO14798 259 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 B4GAT1O43505 415 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 DNAJB5O75953 348 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 RHOQP17081 205 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ITIH2P19823 946 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-203ENST00000397378 FLT3P36888 993 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 OR1D5P58170 312 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 MTM1Q13496 603 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 NR1D2Q14995 579 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 NR6A1Q15406 480 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ZRANB3Q5FWF4 1079 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ATXN7L2Q5T6C5 722 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-203ENST00000397378 SP5Q6BEB4 398 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-203ENST00000397378 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ARCQ7LC44 396 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ZNF438Q7Z4V0 828 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 TAF8Q7Z7C8 310 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 NLRP14Q86W24 1093 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 FAM131BQ86XD5 332 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 MMP21Q8N119 569 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 NELFBQ8WX92 580 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 CASKIN2Q8WXE0 1202 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 C18orf8Q96DM3 657 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 TEFMQ96QE5 360 aaKnown RBP9.46□□□□□ -0.9
NEDD9-203ENST00000397378 CTRCQ99895 268 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 CRACR2AQ9BSW2 395 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 DPEP2Q9H4A9 486 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 SLAMF7Q9NQ25 335 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 OCIAD1Q9NX40 245 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 OR12D3Q9UGF7 316 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
NEDD9-203ENST00000397378 OR1A2Q9Y585 309 aa9.46□□□□□ -0.9
NEDD9-203ENST00000397378 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TSPAN11A1L157 253 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 INPP4BO15327 924 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 KDELR3O43731 214 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 RAMP2O60895 175 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TMCC1O94876 653 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 IGSF6O95976 241 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 FURINP09958 794 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 SLC9A1P19634 815 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 XPAP23025 273 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 MPSTP25325 297 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms