RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ALG9Q9H6U8 611 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 CHCHD3Q9NX63 227 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 BCAP29Q9UHQ4 241 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 DSEQ9UL01 958 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 OAZ3Q9UMX2 235 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 PEX11BO96011 259 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 INHBBP09529 407 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 TUBA4AP68366 448 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 PTPRCAPQ14761 206 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 KRT80Q6KB66 452 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 RWDD4Q6NW29 188 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 NEPROQ6NW34 567 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 ZNF786Q8N393 782 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 VAT1Q99536 393 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 RPF2Q9H7B2 306 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 ADARB2Q9NS39 739 aaKnown RBP13.97□□□□□ -0.17
NUP98-204ENST00000397004 CSADQ9Y600 493 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 H3BMQ9 156 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 CD4P01730 458 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 SLC6A2P23975 617 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 PCSK7Q16549 785 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 ZNF678Q5SXM1 525 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 XKR5Q6UX68 686 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 ADGRG5Q8IZF4 528 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 MFSD2AQ8NA29 543 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 SCAMP5Q8TAC9 235 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 NUDT8Q8WV74 236 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 SGCDQ92629 289 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 COG8Q96MW5 612 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 AURKCQ9UQB9 309 aa13.97□□□□□ -0.17
NUP98-204ENST00000397004 HOXD8P13378 290 aaPredicted RBP13.96□□□□□ -0.17
NUP98-204ENST00000397004 MYF6P23409 242 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 CCT8P50990 548 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 PSMD7P51665 324 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SLC5A3P53794 718 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 ECT2LQ008S8 904 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SNX17Q15036 470 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 ADRM1Q16186 407 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 FAM83EQ2M2I3 478 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 TOP6BLQ8N6T0 577 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 HM13Q8TCT9 377 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 ADI1Q9BV57 179 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 NOL6Q9H6R4 1146 aaKnown RBP13.96□□□□□ -0.17
NUP98-204ENST00000397004 TMLHEQ9NVH6 421 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.96□□□□□ -0.17
NUP98-204ENST00000397004 ZNHIT2Q9UHR6 403 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SLC8A2Q9UPR5 921 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 A0A1W2PPW3 197 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
NUP98-204ENST00000397004 MLLT10P55197 1068 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SLC14A2Q15849 920 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 PLA2G4EQ3MJ16 856 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 TSNARE1Q96NA8 513 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 PPP1R10Q96QC0 940 aaKnown RBP13.96□□□□□ -0.17
NUP98-204ENST00000397004 HAUS8Q9BT25 410 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 NUDT5Q9UKK9 219 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 A0A0J9YYE9 177 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 NCK1P16333 377 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 DNAJB1P25685 340 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 AIF1P55008 147 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 POU4F1Q01851 419 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 MERTKQ12866 999 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SEPT6Q14141 434 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 C16orf72Q14CZ0 275 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 SV2CQ496J9 727 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 RABL3Q5HYI8 236 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 ZNF549Q6P9A3 640 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 NSMCE4AQ9NXX6 385 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 MPP6Q9NZW5 540 aa13.96□□□□□ -0.17
NUP98-204ENST00000397004 A0A087X1B8 175 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 H3BMM5 538 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 AXIN1O15169 862 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 MTSS1O43312 755 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 KPNA6O60684 536 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 CDK14O94921 469 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 IMPDH2P12268 514 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 MTHFD2P13995 350 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 MAGEA10P43363 369 aaPredicted RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 CCNA1P78396 465 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 SAMD4BQ5PRF9 694 aaKnown RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 DCLRE1AQ6PJP8 1040 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 TMEM26Q6ZUK4 368 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 PDZD4Q76G19 769 aaPredicted RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 C14orf80Q86SX3 495 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 LINC00523Q86TU6 105 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 OR52K2Q8NGK3 314 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 C19orf60Q96EN9 201 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 TCF12Q99081 682 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 SLC25A23Q9BV35 468 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 OSBPL6Q9BZF3 934 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms