RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TLN1Q9Y490 2541 aaKnown RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ZFC3H1O60293 1989 aaKnown RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 GALTP07902 379 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 GNAZP19086 355 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 IL1R2P27930 398 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 N4BP2L1Q5TBK1 243 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 DENND1CQ8IV53 801 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 TEX9Q8N6V9 391 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ISG20Q96AZ6 181 aaKnown RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ATXN7L3BQ96GX2 97 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 FAM118BQ9BPY3 351 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 LMAN2LQ9H0V9 348 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 EPS8L2Q9H6S3 715 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 IARS2Q9NSE4 1012 aaKnown RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 RNF186Q9NXI6 227 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 TAGLN3Q9UI15 199 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 RABGEF1Q9UJ41 708 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 PATJQ8NI35 1801 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 URADA6NGE7 173 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 INPPL1O15357 1258 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 MFSD11O43934 449 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ATG13O75143 517 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 CCL5P13501 91 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 FGFR3P22607 806 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ASMTP46597 345 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 THOP1P52888 689 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 KBTBD6Q86V97 674 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 AHI1Q8N157 1196 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 OR2AP1Q8NGE2 309 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 TADA1Q96BN2 335 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 SNX15Q9NRS6 342 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 COL4A1P02462 1669 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 LCHNA4D1U4 455 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 SNTNA6NMZ2 147 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 FAM189BP81408 668 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 LCP2Q13094 533 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 WASHC2DQ5SRD0 308 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 PHYKPLQ8IUZ5 450 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
VPS13C-203ENST00000395896 HS6ST3Q8IZP7 471 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 CSGALNACT1Q8TDX6 532 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 PSMG2Q969U7 264 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 GPR22Q99680 433 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 SMOQ99835 787 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 IKZF4Q9H2S9 585 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 GIMAP4Q9NUV9 329 aa3.4□□□□□ -1.87
VPS13C-203ENST00000395896 A0A0G2JMZ2 1700 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 C1orf232A0A0U1RR37 186 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ABLIM1O14639 778 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RECQL5O94762 991 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GJB5O95377 273 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ACADMP11310 421 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GJA5P36382 358 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 XIAPP98170 497 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DSG1Q02413 1049 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CSTF3Q12996 717 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAXCQ5TGI0 409 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SNX30Q5VWJ9 437 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FBXL22Q6P050 247 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PACS1Q6VY07 963 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 R3HCC1LQ7Z5L2 792 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PTAR1Q7Z6K3 402 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GPSM1Q86YR5 675 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SAMD14Q8IZD0 417 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF655Q8N720 491 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM40Q8WWA1 233 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 HDAC10Q969S8 669 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC22A18Q96BI1 424 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FICDQ9BVA6 458 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 EVA1BQ9NVM1 165 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SCML1Q9UN30 329 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 LRCH1Q9Y2L9 728 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 A0A1W2PQH9 124 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 B2RBV5 119 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TPP1O14773 563 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ASMTLO95671 621 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 EDN1P05305 212 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ACADVLP49748 655 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CLCN4P51793 760 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PLK1P53350 603 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FLOT2Q14254 428 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 LDLRAP1Q5SW96 308 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ICE2Q659A1 982 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CYB5D1Q6P9G0 228 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ZDHHC24Q6UX98 284 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TAC4Q86UU9 113 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SLC51AQ86UW1 340 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAM126BQ8IXS8 530 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 LRRC34Q8IZ02 419 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 GJD3Q8N144 294 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 WDTC1Q8N5D0 677 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 THTPAQ9BU02 230 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CWH43Q9H720 699 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TLE6Q9H808 572 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CRTAC1Q9NQ79 661 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MIEF1Q9NQG6 463 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 UBP1Q9NZI7 540 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 R3HDM2Q9Y2K5 976 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 WASH4PA8MWX3 477 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DYRK3O43781 588 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms