RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GPR63Q9BZJ6 419 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 UGT1A7Q9HAW7 530 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 UGT1A10Q9HAW8 530 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 UGT1A8Q9HAW9 530 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 TXNDC16Q9P2K2 825 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 SLC17A6Q9P2U8 582 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 STON1Q9Y6Q2 735 aa20.48■□□□□ 0.87
VCPKMT-202ENST00000395860 CAPN8A6NHC0 703 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 NPC1O15118 1278 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 FAM155BO75949 473 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 PRNPP04156 253 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 ARNTP27540 789 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 HNF1BP35680 557 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 ARCN1P48444 511 aaKnown RBP20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF140P52738 457 aaPredicted RBP20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 TDGQ13569 410 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 ELAVL3Q14576 367 aaKnown RBP20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 PTPRCAPQ14761 206 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 TEDDM1Q5T9Z0 273 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 USP45Q70EL2 814 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 CHPFQ8IZ52 775 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 SPOCK2Q92563 424 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 EZH1Q92800 747 aaPredicted RBP20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 NLE1Q9NVX2 485 aaPredicted RBP20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF180Q9UJW8 692 aa20.47■□□□□ 0.87
VCPKMT-202ENST00000395860 IQANK1A0A1B0GTG1 560 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 CCL22O00626 93 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 RPP40O75818 363 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 KRT15P19012 456 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TIE1P35590 1138 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 ACVR1Q04771 509 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF805Q5CZA5 627 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TNFAIP8L3Q5GJ75 292 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 LYSMD3Q7Z3D4 306 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TTC30BQ8N4P2 665 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 OR4K2Q8NGD2 314 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 OR6P1Q8NGX9 317 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 HDAC10Q969S8 669 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TLCD1Q96CP7 247 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TBATAQ96M53 351 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 AGAP2Q99490 1192 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 PPIL1Q9Y3C6 166 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 SCN8AQ9UQD0 1980 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 C1orf232A0A0U1RR37 186 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 STX7O15400 261 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 SLC7A4O43246 635 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 SRFP11831 508 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 KIR2DL1P43626 348 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 ARSDP51689 593 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 MAGOHP61326 146 aaKnown RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 GRSF1Q12849 480 aaKnown RBP eCLIP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 TMEM196Q5HYL7 178 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 LGSNQ5TDP6 509 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 GABPB2Q8TAK5 448 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 HCAR2Q8TDS4 363 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 SCRN2Q96FV2 425 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 CPNE1Q99829 537 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 ZFYVE1Q9HBF4 777 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 POLR3BQ9NW08 1133 aaPredicted RBP20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 NSMCE4AQ9NXX6 385 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 PKP3Q9Y446 797 aa20.46■□□□□ 0.87
VCPKMT-202ENST00000395860 CKAP5Q14008 2032 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 A0A0U1RQS6 177 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 TSPAN11A1L157 253 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 LOC730098B7Z3J9 87 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 KPNA3O00505 521 aaPredicted RBP20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 EGFP01133 1207 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 GLULP15104 373 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 DRD1P21728 446 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 WASP42768 502 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 SERPINB9P50453 376 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 ENPP2Q13822 863 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 UGP2Q16851 508 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 POM121L1PQ3SYA9 428 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 FSTL4Q6MZW2 842 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 PACS1Q6VY07 963 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 TAOK1Q7L7X3 1001 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 DSG4Q86SJ6 1040 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 TMIEQ8NEW7 156 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 MAFAQ8NHW3 353 aaPredicted RBP20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 PIP4K2CQ8TBX8 421 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 CALML6Q8TD86 181 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 CDKN2AIPNLQ96HQ2 116 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 LYSMD1Q96S90 227 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 MFSD1Q9H3U5 465 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 PRSS16Q9NQE7 514 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 PRDM6Q9NQX0 595 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 SLC2A4RGQ9NR83 387 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 DKK3Q9UBP4 350 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 GGT7Q9UJ14 662 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 PSAT1Q9Y617 370 aa20.45■□□□□ 0.86
VCPKMT-202ENST00000395860 ATG2BQ96BY7 2078 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 NPIPB15A6NHN6 443 aaPredicted RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 A8MX80 341 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 KRT37O76014 449 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 KRT38O76015 456 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 XPAP23025 273 aaPredicted RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 NFKBIAP25963 317 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 HMGCLP35914 325 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms