RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PCCBP05166 539 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 ZNF28P17035 718 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 GM2AP17900 193 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 MAN1A1P33908 653 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 PGDP52209 483 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 SNRPD1P62314 119 aaKnown RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 GPLD1P80108 840 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 TP53INP2Q8IXH6 220 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 PELI3Q8N2H9 469 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 RYBPQ8N488 228 aaPredicted RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 WDTC1Q8N5D0 677 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 C19orf60Q96EN9 201 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 PGAP3Q96FM1 320 aaPredicted RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 NPY6RQ99463 290 aa13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
VCPKMT-201ENST00000395859 PRSS38A1L453 326 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CDC14CA4D256 554 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CACNB4O00305 520 aaPredicted RBP13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 PMM2O15305 246 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CREG1O75629 220 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 GRAP2O75791 330 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CEACAM4O75871 244 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 MYL1P05976 194 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 EPB41P11171 864 aaKnown RBP13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 VARSP26640 1264 aaKnown RBP13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 MMP12P39900 470 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 LIG3P49916 1009 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 ELP6Q0PNE2 266 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 NR6A1Q15406 480 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 WDR74Q6RFH5 385 aaPredicted RBP13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 OLFML1Q6UWY5 402 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CEP57L1Q8IYX8 460 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 HCAR2Q8TDS4 363 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 HMCESQ96FZ2 354 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 RANBP9Q96S59 729 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CPXM1Q96SM3 734 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 NDFIP2Q9NV92 336 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 TRNAU1APQ9NX07 287 aaKnown RBP13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 KCND3Q9UK17 655 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 PKDREJQ9NTG1 2253 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 PCSK5Q92824 1860 aa13.7□□□□□ -0.22
VCPKMT-201ENST00000395859 CFAP69A5D8W1 941 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 DAB1O75553 588 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 PTMSP20962 102 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 KELP23276 732 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 NFKBIAP25963 317 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 FASLGP48023 281 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 GCNT1Q02742 428 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 LAMB3Q13751 1172 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 UGP2Q16851 508 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 ACBD5Q5T8D3 534 aaPredicted RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 CPZQ66K79 652 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 LRRC31Q6UY01 552 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 LYSMD3Q7Z3D4 306 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 RBMXL3Q8N7X1 1067 aaKnown RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 ZNF606Q8WXB4 792 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 NT5C1BQ96P26 610 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC25A23Q9BV35 468 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 WDCPQ9H6R7 721 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 PCDH12Q9NPG4 1184 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 PCDHGB7Q9Y5F8 929 aa13.69□□□□□ -0.22
VCPKMT-201ENST00000395859 POLR1CO15160 346 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC16A3O15427 465 aaKnown RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 CEACAM5P06731 702 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 NDST2P52849 883 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 RALGDSQ12967 914 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 POLD3Q15054 466 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 ZXDCQ2QGD7 858 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC6A19Q695T7 634 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 SPNS3Q6ZMD2 512 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC26A9Q7LBE3 791 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 BNIPLQ7Z465 357 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 PPM1KQ8N3J5 372 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 ZNF397Q8NF99 534 aaPredicted RBP13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 PNPLA2Q96AD5 504 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 ZYG11BQ9C0D3 744 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 LUZP4Q9P127 313 aa13.68□□□□□ -0.22
VCPKMT-201ENST00000395859 PPARGC1AQ9UBK2 798 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms