RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ARL10Q8N8L6 244 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 GLMNQ92990 594 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 CCDC74AQ96AQ1 378 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 NAF1Q96HR8 494 aaKnown RBP18.09■□□□□ 0.49
CXCL12-204ENST00000395793 COQ10AQ96MF6 247 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 ZNF578Q96N58 590 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-204ENST00000395793 NUDCD1Q96RS6 583 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 RBM15Q96T37 977 aaKnown RBP eCLIP18.09■□□□□ 0.49
CXCL12-204ENST00000395793 MGME1Q9BQP7 344 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 NOD2Q9HC29 1040 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 GPR34Q9UPC5 381 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 BZW2Q9Y6E2 419 aaKnown RBP18.09■□□□□ 0.49
CXCL12-204ENST00000395793 DGKBQ9Y6T7 804 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 BPTFQ12830 3046 aa18.09■□□□□ 0.49
CXCL12-204ENST00000395793 SCN8AQ9UQD0 1980 aa18.08■□□□□ 0.49
CXCL12-204ENST00000395793 NTN3O00634 580 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-204ENST00000395793 CPP00450 1065 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 ALPIP09923 528 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 TRIM23P36406 574 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 ARSEP51690 589 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 ESRP1Q6NXG1 681 aaKnown RBP18.08■□□□□ 0.48
CXCL12-204ENST00000395793 LVRNQ6Q4G3 990 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 ATPAF2Q8N5M1 289 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 PAF1Q8N7H5 531 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 OR56A4Q8NGH8 313 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 TPCN2Q8NHX9 752 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 FAM71BQ8TC56 605 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 FCRL3Q96P31 734 aaPredicted RBP18.08■□□□□ 0.48
CXCL12-204ENST00000395793 IP6K2Q9UHH9 426 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 DOLKQ9UPQ8 538 aa18.08■□□□□ 0.48
CXCL12-204ENST00000395793 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 MFSD11O43934 449 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 SOCS5O75159 536 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 TCEA3O75764 348 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 HEXIM1O94992 359 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 TNFP01375 233 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 LHCGRP22888 699 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 HSPA9P38646 679 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 CDH6P55285 790 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 PCBP4P57723 403 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 POLR2LP62875 67 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 IHHQ14623 411 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 ACOX1Q15067 660 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 ATP13A4Q4VNC1 1196 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 ALKBH5Q6P6C2 394 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 IGF2-ASQ6U949 168 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 B3GNT8Q7Z7M8 397 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 LSMEM2Q8N112 164 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 CBARPQ8N350 705 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 ZNF248Q8NDW4 579 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 GPR156Q8NFN8 814 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 CCL4L1Q8NHW4 92 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 PDCD6IPQ8WUM4 868 aaKnown RBP18.07■□□□□ 0.48
CXCL12-204ENST00000395793 SMIM14Q96QK8 99 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 LGMNQ99538 433 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 SYNDIG1Q9H7V2 258 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 IFNKQ9P0W0 207 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 UNC13CQ8NB66 2214 aa18.07■□□□□ 0.48
CXCL12-204ENST00000395793 A0A0U1RQS6 177 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 A0A1W2PQM1 296 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 CACNB4O00305 520 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-204ENST00000395793 NOBOXO60393 691 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 HOXC4P09017 264 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-204ENST00000395793 VIPR1P32241 457 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 MMP13P45452 471 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 ERVPABLB-1P60509 514 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 PNCKQ6P2M8 343 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 HSD11B1LQ7Z5J1 315 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 TSPAN33Q86UF1 283 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 GKN2Q86XP6 184 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 SDR16C5Q8N3Y7 309 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 PTCD2Q8WV60 388 aaKnown RBP18.06■□□□□ 0.48
CXCL12-204ENST00000395793 NUS1Q96E22 293 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 TMEM168Q9H0V1 697 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 WDR26Q9H7D7 661 aa18.06■□□□□ 0.48
CXCL12-204ENST00000395793 NPIPB15A6NHN6 443 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-204ENST00000395793 PGLSO95336 258 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 MAP3K6O95382 1288 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 FUCA1P04066 466 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 CASP14P31944 242 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 SERPINB6P35237 376 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 ETV3P41162 512 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 TAS2R40P59535 323 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 TPM4P67936 248 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 CCL7P80098 99 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 SKOR1P84550 965 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 SPIDRQ14159 915 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 KRT81Q14533 505 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 DENND2CQ68D51 928 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 NCBP2-AS2Q69YL0 99 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 TEX26Q8N6G2 289 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-204ENST00000395793 SCG3Q8WXD2 468 aaKnown RBP18.05■□□□□ 0.48
CXCL12-204ENST00000395793 DTD2Q96FN9 168 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 SLC46A1Q96NT5 459 aa18.05■□□□□ 0.48
CXCL12-204ENST00000395793 UBL7Q96S82 380 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms