RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 MRM3Q9HC36 420 aaKnown RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 C15orf41Q9Y2V0 281 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 MROH6A6NGR9 719 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 APOA4P06727 396 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 MZF1P28698 734 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 LEPRP48357 1165 aaKnown RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 CDH13P55290 713 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 WASHC2DQ5SRD0 308 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 MAB21L3Q8N8X9 362 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 SCUBE2Q9NQ36 999 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 FNIP2Q9P278 1114 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 AFF4Q9UHB7 1163 aaKnown RBP17.95■□□□□ 0.46
SREBF1-204ENST00000395756 SLC7A8Q9UHI5 535 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 RAP2CQ9Y3L5 183 aa17.95■□□□□ 0.46
SREBF1-204ENST00000395756 FRMPD3Q5JV73 1810 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TARM1B6A8C7 271 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 PTDSS1P48651 473 aaKnown RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 BBS5Q8N3I7 341 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TM6SF2Q9BZW4 377 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 SEPT3Q9UH03 358 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 PLA2G4CQ9UP65 541 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 A0A1B0GVG6 124 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 A8MX80 341 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 MATN2O00339 956 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 HDAC3O15379 428 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 BNIP3LO60238 219 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TBL1XO60907 577 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 BAG2O95816 211 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 SP100P23497 879 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 FMO4P31512 558 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 MSX2P35548 267 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 CDH4P55283 916 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 MRPL57Q9BQC6 102 aaKnown RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TTLL2Q9BWV7 592 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TNFRSF12AQ9NP84 129 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 PAK6Q9NQU5 681 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 MID2Q9UJV3 735 aa17.94■□□□□ 0.46
SREBF1-204ENST00000395756 FCF1Q9Y324 198 aaKnown RBP17.94■□□□□ 0.46
SREBF1-204ENST00000395756 TMEM114B3SHH9 223 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 H3BNC9 293 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 AOC1P19801 751 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ASPHQ12797 758 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 TCHHL1Q5QJ38 904 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ADGRF1Q5T601 910 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 AGAP9Q5VTM2 703 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 OTOP2Q7RTS6 562 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 GLT6D1Q7Z4J2 308 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 DEFB107AQ8IZN7 70 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 C2orf15Q8WU43 125 aaKnown RBP17.93■□□□□ 0.46
SREBF1-204ENST00000395756 TTC1Q99614 292 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 MAGEH1Q9H213 219 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 NCKIPSDQ9NZQ3 722 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 SSX2IPQ9Y2D8 614 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 WASF2Q9Y6W5 498 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 K7ERQ8 282 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 SLC7A4O43246 635 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 GRID2O43424 1007 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 SUPT7LO94864 414 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 LTA4HP09960 611 aaKnown RBP17.93■□□□□ 0.46
SREBF1-204ENST00000395756 CSF2RAP15509 400 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 CSRP3P50461 194 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ATXN3P54252 364 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ZXDBP98169 803 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ATXN7L2Q5T6C5 722 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-204ENST00000395756 RIPOR1Q6ZS17 1223 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ATP6AP2A0A1C7CYW4 349 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 CFLARO15519 480 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ATP6AP2O75787 350 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 HDCP19113 662 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ITGB8P26012 769 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 CYP4F8P98187 520 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 VEPH1Q14D04 833 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 KLC3Q6P597 504 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ZNF549Q6P9A3 640 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 TPGS1Q6ZTW0 290 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 ARHGAP24Q8N264 748 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 OR4L1Q8NH43 312 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 BRSK1Q8TDC3 778 aa17.93■□□□□ 0.46
SREBF1-204ENST00000395756 A0A087X1B8 175 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 LRRC14BA6NHZ5 514 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 INSIG1O15503 277 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 CLDN11O75508 207 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 CIB2O75838 187 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 KLF10Q13118 480 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 PRKAA1Q13131 559 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 CCDC117Q8IWD4 279 aaPredicted RBP17.92■□□□□ 0.46
SREBF1-204ENST00000395756 RNF148Q8N7C7 305 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 MDGA1Q8NFP4 955 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 CDKN2AIPNLQ96HQ2 116 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 ZNF558Q96NG5 402 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 PANX3Q96QZ0 392 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 SIKE1Q9BRV8 207 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 MFSD1Q9H3U5 465 aa17.92■□□□□ 0.46
SREBF1-204ENST00000395756 DCLRE1BQ9H816 532 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms