RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 PACSIN3Q9UKS6 424 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ENTPD4Q9Y227 616 aa5.69□□□□□ -1.5
AP3S1-202ENST00000395548 RP1L1Q8IWN7 2480 aaPredicted RBP5.69□□□□□ -1.5
AP3S1-202ENST00000395548 ARHGAP10A1A4S6 786 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 FAM170AA1A519 330 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 TMEM189-UBE2V1I3L0A0 370 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 MEIS2O14770 477 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 B3GALT2O43825 422 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 TUSC2O75896 110 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 B3GAT3O94766 335 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 NFATC1O95644 943 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 CCNE2O96020 404 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 APODP05090 189 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 THP07101 528 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 RNF224P0DH78 156 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 CD1EP15812 388 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 DDX6P26196 483 aaKnown RBP eCLIP5.68□□□□□ -1.55e-6■■■■■ 34.8
AP3S1-202ENST00000395548 PEX2P28328 305 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 TKTP29401 623 aaKnown RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 TNFRSF4P43489 277 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 UQCRFS1P47985 274 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 PRIM2P49643 509 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 ADKP55263 362 aaKnown RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 NANOS3P60323 173 aaKnown RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 MPP1Q00013 466 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 NHLH2Q02577 135 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 KLRB1Q12918 225 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 BLMHQ13867 455 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 ANO4Q32M45 955 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 ZSCAN30Q86W11 494 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 PLXDC1Q8IUK5 500 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 VRK3Q8IV63 474 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 LILRA3Q8N6C8 439 aaPredicted RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 OR10H5Q8NGA6 315 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 ZFP28Q8NHY6 868 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 PPP1R35Q8TAP8 253 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 OSCP1Q8WVF1 389 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 ESR2Q92731 530 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 C1GALT1C1Q96EU7 318 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 UBXN10Q96LJ8 280 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 NLRP4Q96MN2 994 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 PNKPQ96T60 521 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 JPH2Q9BR39 696 aaPredicted RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 BHMT2Q9H2M3 363 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 AKIP1Q9NQ31 210 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 SEPT10Q9P0V9 454 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 SUCLA2Q9P2R7 463 aaPredicted RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 EXOC6BQ9Y2D4 811 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 YIPF1Q9Y548 306 aa5.68□□□□□ -1.5
AP3S1-202ENST00000395548 NUP210Q8TEM1 1887 aaPredicted RBP5.68□□□□□ -1.5
AP3S1-202ENST00000395548 A0A1B0GTQ1 180 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 CDRT15L2A8MXV6 281 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 H3BML4 177 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 DDX39AO00148 427 aaKnown RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 TMCC2O75069 709 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 MTHFD2P13995 350 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 HOXB2P14652 356 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 ACP1P24666 158 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 OXTRP30559 389 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 SLC6A4P31645 630 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 POLE2P56282 527 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 IL9RQ01113 521 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 ITGB3BPQ13352 177 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 ZNF268Q14587 947 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 MTF1Q14872 753 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 TAF11Q15544 211 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 BMT2Q1RMZ1 405 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 MFSD6Q6ZSS7 791 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 TBC1D1Q86TI0 1168 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 DENND1CQ8IV53 801 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 KRT78Q8N1N4 520 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 EID2Q8N6I1 236 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 C9orf43Q8TAL5 461 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 PSMG2Q969U7 264 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 HDAC11Q96DB2 347 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 LURAP1Q96LR2 239 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 PIGSQ96S52 555 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 GPR174Q9BXC1 333 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 EIF2AQ9BY44 585 aaKnown RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 UNKQ9C0B0 810 aaKnown RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 RNF41Q9H4P4 317 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 CCM2LQ9NUG4 571 aaPredicted RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 CACNG4Q9UBN1 327 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 L1RE1Q9UN81 338 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 CHST2Q9Y4C5 530 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 HES2Q9Y543 173 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 PCDHA10Q9Y5I2 948 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 TDRD15B5MCY1 1934 aaKnown RBP5.67□□□□□ -1.5
AP3S1-202ENST00000395548 STAB1Q9NY15 2570 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 KIAA1549LQ6ZVL6 1849 aa5.67□□□□□ -1.5
AP3S1-202ENST00000395548 A0A087WV62 115 aa5.66□□□□□ -1.5
AP3S1-202ENST00000395548 CENPVL1A0A0U1RR11 272 aa5.66□□□□□ -1.5
AP3S1-202ENST00000395548 TMEM200CA6NKL6 621 aa5.66□□□□□ -1.5
AP3S1-202ENST00000395548 RHPN2P1A8MT19 583 aa5.66□□□□□ -1.5
AP3S1-202ENST00000395548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.66□□□□□ -1.5
AP3S1-202ENST00000395548 LEFTY2O00292 366 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms