RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CHKBQ9Y259 395 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ATP6V0D1P61421 351 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MYBPC1Q00872 1141 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ATP1A4Q13733 1029 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 IL17AQ16552 155 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ZACNQ401N2 412 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ABHD15Q6UXT9 468 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 CHSY3Q70JA7 882 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 POLNQ7Z5Q5 900 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PEG10Q86TG7 708 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 C2orf73Q8N5S3 287 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MFSD14AQ96MC6 490 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MRPS33Q9Y291 106 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TBC1D30Q9Y2I9 924 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 RWDD3Q9Y3V2 267 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MDM4O15151 490 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SPATA31C1P0DKV0 1188 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 HNMTP50135 292 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SMIM11AP58511 58 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ERVK-21P61565 698 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 NRF1Q16656 503 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MZT2AQ6P582 158 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 OR14C36Q8NHC7 312 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MAGEE2Q8TD90 523 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 UBASH3BQ8TF42 649 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 DCUN1D5Q9BTE7 237 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 FNDC11Q9BVV2 318 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 LMAN2LQ9H0V9 348 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 NDRG2Q9UN36 371 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PNMA8CA0A1B0GUJ8 204 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 NPEPPSL1A6NEC2 478 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 WWP2O00308 870 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 C1RP00736 705 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 EPHX1P07099 455 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 BMP7P18075 431 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 GRIA3P42263 894 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 WNT3AP56704 352 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SPANXN2Q5MJ10 180 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ANXA8L1Q5VT79 327 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 NEK5Q6P3R8 708 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PIWIL2Q8TC59 973 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PGM2Q96G03 612 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ITCHQ96J02 903 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF354BQ96LW1 612 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PANX1Q96RD7 426 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 EBNA1BP2Q99848 306 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 AARSD1Q9BTE6 412 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 C1orf50Q9BV19 199 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PCYOX1Q9UHG3 505 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 GLTPD2A6NH11 291 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 H3BNH8 94 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SEPT4O43236 478 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ITGA2BP08514 1039 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 CCNA2P20248 432 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 UGT2B15P54855 530 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SPIBQ01892 262 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TOP3AQ13472 1001 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 VSTM1Q6UX27 236 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 AADATQ8N5Z0 425 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF563Q8TA94 476 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PHF10Q8WUB8 498 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 PPCDCQ96CD2 204 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TIFAQ96CG3 184 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SGK2Q9HBY8 427 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF541Q9H0D2 1346 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ABHD14A-ACY1A0A1B0GW23 586 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ITPKBP27987 946 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TPP2P29144 1249 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 TNK2Q07912 1038 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 LIPMQ5VYY2 423 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 ING5Q8WYH8 240 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 SHC3Q92529 594 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 CAPNS2Q96L46 248 aa10.41□□□□□ -0.74
COL4A6-203ENST00000394872 DUS2Q9NX74 493 aaKnown RBP10.41□□□□□ -0.74
COL4A6-203ENST00000394872 GLYATL1P3A0A0U1RQE8 302 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 SNPHO15079 494 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 PDE9AO76083 593 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ECDO95905 644 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 SHBGP04278 402 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF37AP17032 561 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TAF5Q15542 800 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 HSDL1Q3SXM5 330 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 PARP15Q460N3 678 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TAPT1Q6NXT6 567 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TATDN1Q6P1N9 297 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 C17orf64Q86WR6 236 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 AGO3Q9H9G7 860 aaKnown RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 MRTO4Q9UKD2 239 aaKnown RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 CLUHO75153 1309 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 USP2O75604 605 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 VIPP01282 170 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TSHRP16473 764 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 RTL3Q8N8U3 475 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms