RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 ZNF557Q8N988 423 aaPredicted RBP12.62□□□□□ -0.39
SSH2-203ENST00000394848 MDGA1Q8NFP4 955 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 OR13C4Q8NGS5 318 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 E2F7Q96AV8 911 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 RPL10LQ96L21 214 aaKnown RBP12.62□□□□□ -0.39
SSH2-203ENST00000394848 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
SSH2-203ENST00000394848 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 CDH7Q9ULB5 785 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 ANKRD6Q9Y2G4 727 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
SSH2-203ENST00000394848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 CCDC162PA2VCL2 907 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 OR51F1A6NGY5 319 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CD3EAPO15446 510 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 FZD6O60353 706 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 GOT2P00505 430 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 PROCP04070 461 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 STMN1P16949 149 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CRABP2P29373 138 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 MAPK8P45983 427 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CSRP3P50461 194 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 EPHB1P54762 984 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 BCL2L1Q07817 233 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 FUT11Q495W5 492 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ARMC12Q5T9G4 340 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ATG16L1Q676U5 607 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 MRNIPQ6NTE8 343 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 GALNT7Q86SF2 657 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CAMK1DQ8IU85 385 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 GPR150Q8NGU9 434 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 OR4L1Q8NH43 312 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ELMO2Q96JJ3 720 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 SMIM14Q96QK8 99 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 TSSK1BQ9BXA7 367 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ZNF358Q9NW07 568 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 EVLQ9UI08 416 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 UNC80Q8N2C7 3258 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 DOCK6Q96HP0 2047 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 ZNF821O75541 412 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 KIAA0754O94854 1291 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 S1PR4O95977 384 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 GSRP00390 522 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 PABPC1P11940 636 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 SRCP12931 536 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 ZNF140P52738 457 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 SLC12A2P55011 1212 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 RAB10P61026 200 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 IRF9Q00978 393 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 POU4F1Q01851 419 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CHI3L2Q15782 390 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 FASTKD1Q53R41 847 aaKnown RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 TAF1BQ53T94 588 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 ZNF789Q5FWF6 425 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 RNF187Q5TA31 235 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 LDB1Q86U70 411 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 RYBPQ8N488 228 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 OR4K2Q8NGD2 314 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 RAB3IL1Q8TBN0 382 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 OMDQ99983 421 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 TNKS2Q9H2K2 1166 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 HACD3Q9P035 362 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
SSH2-203ENST00000394848 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 HS3ST2Q9Y278 367 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 ACOT9Q9Y305 439 aa12.61□□□□□ -0.39
SSH2-203ENST00000394848 CCT8L1PA6NM43 557 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 PGLSO95336 258 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 IGSF6O95976 241 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 SLC35E2BP0CK96 405 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 COL6A2P12110 1019 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 LAMP2P13473 410 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 PSMA3P25788 255 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
SSH2-203ENST00000394848 CLCN5P51795 746 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 PGGT1BP53609 377 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 TAS2R39P59534 338 aa12.6□□□□□ -0.39
SSH2-203ENST00000394848 ILF2Q12905 390 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms