RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TPSAB1Q15661 275 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UGT2A3Q6UWM9 527 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FKBP9P1Q75LS8 142 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 SLC26A9Q7LBE3 791 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 GALNT5Q7Z7M9 940 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 C11orf74Q86VG3 221 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 GFM2Q969S9 779 aaKnown RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FAM162AQ96A26 154 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 C12orf43Q96C57 262 aaKnown RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 BPIFA1Q9NP55 256 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 MRPL40Q9NQ50 206 aaKnown RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FETUBQ9UGM5 382 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 GPR32O75388 356 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 NDUFS3O75489 264 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF682O95780 498 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 LDLRP01130 860 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 S100BP04271 92 aaPredicted RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 CDK4P11802 303 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ACADSBP45954 432 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ZBTB17Q13105 803 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 TBL1YQ9BQ87 522 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 SLC25A23Q9BV35 468 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ST14Q9Y5Y6 855 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 IQCA1LA6NCM1 817 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 LRIG2O94898 1065 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 APOA4P06727 396 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 HSMCR30P0CW71 290 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UGT1A1P22309 533 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UGT1A4P22310 534 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UGT1A3P35503 534 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UGT1A5P35504 534 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 THPOP40225 353 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 LAPTM5Q13571 262 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 DDX39BQ13838 428 aaKnown RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 PGS1Q32NB8 556 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 PLA2G4EQ3MJ16 856 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ZRANB3Q5FWF4 1079 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 POTEHQ6S545 545 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
NFKB1-202ENST00000394820 LRRC52Q8N7C0 313 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FAM110BQ8TC76 370 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 HTRA1Q92743 480 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ULK4Q96C45 1275 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ACOX2Q99424 681 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FANCEQ9HB96 536 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ST3GAL5Q9UNP4 418 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 PSME4Q14997 1843 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 MYO10Q9HD67 2058 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 TMEM247A6NEH6 219 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 PPP6CO00743 305 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 SYNCRIPO60506 623 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 CLK1P49759 484 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 NR6A1Q15406 480 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ATP6AP1LQ52LC2 224 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 C6orf183Q5T699 404 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 C4orf22Q6V702 233 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 KCTD8Q6ZWB6 473 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 GPRIN1Q7Z2K8 1008 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 CAMK1DQ8IU85 385 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 HPS1Q92902 700 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 IL22Q9GZX6 179 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ITM2CQ9NQX7 267 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 OXSMQ9NWU1 459 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 CNOT6Q9ULM6 557 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ATP11BQ9Y2G3 1177 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 RLFQ13129 1914 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 OR4Q2P0C623 313 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 NOS2P35228 1153 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 IKBKEQ14164 716 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 FSCN1Q16658 493 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 CEP97Q8IW35 865 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 SMAD5Q99717 465 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 DUSP16Q9BY84 665 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 NAA50Q9GZZ1 169 aaKnown RBP13.25□□□□□ -0.29
NFKB1-202ENST00000394820 RHOJQ9H4E5 214 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 KCTD3Q9Y597 815 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 SDK1Q7Z5N4 2213 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 WDR81Q562E7 1941 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 PRORSD1PA6NEY8 169 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 MATN2O00339 956 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 THP07101 528 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 SLC1A2P43004 574 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 GALNT3Q14435 633 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 METTL23Q86XA0 190 aa13.25□□□□□ -0.29
NFKB1-202ENST00000394820 TXNDC5Q8NBS9 432 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms