RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 HTRA2O43464 458 aaPredicted RBP16.24■□□□□ 0.19
TGFA-202ENST00000394241 AP1G1O43747 822 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 CASQ1P31415 396 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 SNX1Q13596 522 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 OASLQ15646 514 aaKnown RBP16.24■□□□□ 0.19
TGFA-202ENST00000394241 SLC14A2Q15849 920 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 CCNG2Q16589 344 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 WDR45BQ5MNZ6 344 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 FAM182AQ5T1J6 154 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 ARMC12Q5T9G4 340 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 SYT10Q6XYQ8 523 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 TTC7BQ86TV6 843 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 GALNT15Q8N3T1 639 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 FAM71DQ8N9W8 422 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 IMP4Q96G21 291 aaKnown RBP16.24■□□□□ 0.19
TGFA-202ENST00000394241 SPATA13Q96N96 652 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.19
TGFA-202ENST00000394241 TMEM121Q9BTD3 319 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 TDRD1Q9BXT4 1180 aaKnown RBP16.24■□□□□ 0.19
TGFA-202ENST00000394241 GBA3Q9H227 469 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 ZNF148Q9UQR1 794 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 NUMA1Q14980 2115 aa16.24■□□□□ 0.19
TGFA-202ENST00000394241 TENM4Q6N022 2769 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3DA0A087WVF3 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3IA0A087WXS9 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3EA0A087X179 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3KA0A087X1G2 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3FA6NER0 549 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3LB9A6J9 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 NEMP1O14524 444 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ZNF185O15231 689 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 FANCGO15287 622 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 DKK1O94907 266 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 PGLSO95336 258 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 MMP2P08253 660 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ATXN1LP0C7T5 689 aaKnown RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3HP0C7X1 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 NFKBIAP25963 317 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 CD68P34810 354 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 TAS2R38P59533 333 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 POLR2LP62875 67 aaKnown RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 SKOR1P84550 965 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ELP6Q0PNE2 266 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 UGP2Q16851 508 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 LRRC73Q5JTD7 316 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 KIAA0895LQ68EN5 471 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3GQ6DHY5 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3CQ6IPX1 549 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 ARHGEF18Q6ZSZ5 1173 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 ZSWIM9Q86XI8 627 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TBC1D3Q8IZP1 549 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 BAHD1Q8TBE0 780 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 SPOCK2Q92563 424 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 FCRL5Q96RD9 977 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 C6orf106Q9H6K1 298 aaPredicted RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 SMARCAL1Q9NZC9 954 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 TPX2Q9ULW0 747 aaKnown RBP16.23■□□□□ 0.19
TGFA-202ENST00000394241 FADS3Q9Y5Q0 445 aa16.23■□□□□ 0.19
TGFA-202ENST00000394241 KNTC1P50748 2209 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 C5orf60A6NFR6 353 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 FSBPO95073 299 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 ITGAVP06756 1048 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 ZNF883P0CG24 379 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 TIMP2P16035 220 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 MAOBP27338 520 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 STIP1P31948 543 aaKnown RBP16.22■□□□□ 0.19
TGFA-202ENST00000394241 ACTN2P35609 894 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 EPHB1P54762 984 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 GDF10P55107 478 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 NEK5Q6P3R8 708 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PRPF39Q86UA1 669 aaKnown RBP16.22■□□□□ 0.19
TGFA-202ENST00000394241 ZSCAN30Q86W11 494 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PDCD7Q8N8D1 485 aaKnown RBP16.22■□□□□ 0.19
TGFA-202ENST00000394241 PRELID2Q8N945 189 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 LSM14AQ8ND56 463 aaKnown RBP16.22■□□□□ 0.19
TGFA-202ENST00000394241 CCDC110Q8TBZ0 833 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 SNX19Q92543 992 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 RTP4Q96DX8 246 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 CAPZA3Q96KX2 299 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PPP1R2P1Q96PQ5 205 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 CDC6Q99741 560 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 GAREM1Q9H706 876 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 IL21RQ9HBE5 538 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PCDH9Q9HC56 1237 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PCDH12Q9NPG4 1184 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 TM7SF3Q9NS93 570 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 FAM153AQ9UHL3 310 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 ITM2BQ9Y287 266 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 PTPRQQ9UMZ3 2332 aa16.22■□□□□ 0.19
TGFA-202ENST00000394241 CABIN1Q9Y6J0 2220 aa16.21■□□□□ 0.19
TGFA-202ENST00000394241 A0A1B0GTW7 788 aa16.21■□□□□ 0.19
TGFA-202ENST00000394241 METTL12A8MUP2 240 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms