RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ZNF689Q96CS4 500 aaPredicted RBP11.19□□□□□ -0.62
CUX1-204ENST00000393824 CCDC138Q96M89 665 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
CUX1-204ENST00000393824 TUBA1CQ9BQE3 449 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 PSD2Q9BQI7 771 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 C1orf50Q9BV19 199 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 MROQ9BYG7 248 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 ILKAPQ9H0C8 392 aaPredicted RBP11.19□□□□□ -0.62
CUX1-204ENST00000393824 WDR55Q9H6Y2 383 aaPredicted RBP11.19□□□□□ -0.62
CUX1-204ENST00000393824 CWH43Q9H720 699 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 TMLHEQ9NVH6 421 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 MTMR10Q9NXD2 777 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 SEPT3Q9UH03 358 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 TSPAN16Q9UKR8 245 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 SNX13Q9Y5W8 968 aa11.19□□□□□ -0.62
CUX1-204ENST00000393824 GOLGA8QA0A0J9YX86 632 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 GOLGA8OA6NCC3 632 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 GOLGA8NF8WBI6 632 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 J3QRK9 145 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 M0QZQ0 153 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PAPSS1O43252 624 aaPredicted RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 TRIM13O60858 407 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PTPN2P17706 415 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 IL4RP24394 825 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 TYK2P29597 1187 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 MAGEA12P43365 314 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 NR2C2P49116 596 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 NME5P56597 212 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 CD300CQ08708 224 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 NSUN2Q08J23 767 aaKnown RBP eCLIP11.18□□□□□ -0.62
CUX1-204ENST00000393824 NFATC3Q12968 1075 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 SEMA5AQ13591 1074 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 FAM109BQ6ICB4 259 aaPredicted RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 HMBOX1Q6NT76 420 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 CHSY3Q70JA7 882 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 SIX6OS1Q8N1H7 587 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 ZNF786Q8N393 782 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 TOP6BLQ8N6T0 577 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PQLC3Q8N755 202 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PDPRQ8NCN5 879 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 ISL2Q96A47 359 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 FBXL8Q96CD0 374 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PIWIL1Q96J94 861 aaKnown RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 ZNF670Q9BS34 389 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 NAT9Q9BTE0 207 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 EFHD1Q9BUP0 239 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 TPK1Q9H3S4 243 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 HACD3Q9P035 362 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 VWA8A3KMH1 1905 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 LCHNA4D1U4 455 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 G3V2L1 256 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 AMHP03971 560 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 VDRP11473 427 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 TCN1P20061 433 aaPredicted RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 JAK1P23458 1154 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 RPL10P27635 214 aaKnown RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 PRKCQQ04759 706 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 FPGSQ05932 587 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 PHKG1Q16816 387 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 FAM102AQ5T9C2 384 aaPredicted RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 RSPO2Q6UXX9 243 aaPredicted RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 UNC5BQ8IZJ1 945 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 B3GALNT2Q8NCR0 500 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 LSM14AQ8ND56 463 aaKnown RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 FAM156AQ8NDB6 213 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 SLC7A14Q8TBB6 771 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 SLC2A14Q8TDB8 520 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 TAMM41Q96BW9 452 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 SH3GL1Q99961 368 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 NOL11Q9H8H0 719 aaKnown RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 RAP2CQ9Y3L5 183 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
CUX1-204ENST00000393824 MRPL42Q9Y6G3 142 aaKnown RBP11.18□□□□□ -0.62
CUX1-204ENST00000393824 CROCCQ5TZA2 2017 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 M0QYV0 167 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 DLGAP1O14490 977 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 MDM4O15151 490 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 METTL18O95568 372 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 CKMT2P17540 419 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 FGFR3P22607 806 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 WARSP23381 471 aaKnown RBP11.17□□□□□ -0.62
CUX1-204ENST00000393824 ADORA2BP29275 332 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 GPD2P43304 727 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 RPL14P50914 215 aaKnown RBP11.17□□□□□ -0.62
CUX1-204ENST00000393824 TMBIM6P55061 237 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 PRAMEP78395 509 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 ITGADQ13349 1161 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 STILQ15468 1287 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 PKDCCQ504Y2 493 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 RTP2Q5QGT7 225 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 C9orf50Q5SZB4 431 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 FAM182AQ5T1J6 154 aa11.17□□□□□ -0.62
CUX1-204ENST00000393824 INTS11Q5TA45 600 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms