RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 OLFM1Q99784 485 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 TMEM120AQ9BXJ8 343 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 KCNK4Q9NYG8 393 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 TBC1D14Q9P2M4 693 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 PCDHB9Q9Y5E1 797 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 HGSO14964 777 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 H2AFYO75367 372 aaKnown RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 PRAMEF12O95522 483 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 MYL2P10916 166 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 HOXB8P17481 243 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 HLA-FP30511 346 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ABL2P42684 1182 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 GRIA4P48058 902 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 KPNA2P52292 529 aaKnown RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 GPM6BQ13491 265 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ITGA9Q13797 1035 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ZNF77Q15935 545 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 PITRM1Q5JRX3 1037 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ZNF697Q5TEC3 545 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 AFTPHQ6ULP2 937 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ZYG11AQ6WRX3 759 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 TBC1D1Q86TI0 1168 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 FSTL5Q8N475 847 aaPredicted RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 TTC8Q8TAM2 541 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 ERP27Q96DN0 273 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 MYLK2Q9H1R3 596 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 OXSMQ9NWU1 459 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 CPSF2Q9P2I0 782 aaKnown RBP22.23■■□□□ 1.15
HMGA2-203ENST00000393578 HCFC2Q9Y5Z7 792 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 MYO7AQ13402 2215 aa22.23■■□□□ 1.15
HMGA2-203ENST00000393578 TRIM13O60858 407 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 TCF3P15923 654 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 STC1P52823 247 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 EPHB1P54762 984 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 RPL26P61254 145 aaKnown RBP22.22■■□□□ 1.15
HMGA2-203ENST00000393578 TYSND1Q2T9J0 566 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 SPDYAQ5MJ70 313 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 C9orf50Q5SZB4 431 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 ARMC12Q5T9G4 340 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 LRRC8EQ6NSJ5 796 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 PNPLA1Q8N8W4 532 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 ZNF557Q8N988 423 aaPredicted RBP22.22■■□□□ 1.15
HMGA2-203ENST00000393578 IRF7Q92985 503 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 ZNF707Q96C28 371 aaPredicted RBP22.22■■□□□ 1.15
HMGA2-203ENST00000393578 NXNL1Q96CM4 212 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 SCYL1Q96KG9 808 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 SMIM14Q96QK8 99 aa22.22■■□□□ 1.15
HMGA2-203ENST00000393578 INTS10Q9NVR2 710 aaKnown RBP22.22■■□□□ 1.15
HMGA2-203ENST00000393578 RPL26L1Q9UNX3 145 aaKnown RBP22.22■■□□□ 1.15
HMGA2-203ENST00000393578 TK2O00142 265 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 ITM2AO43736 263 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 DNAJC6O75061 913 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PGLSO95336 258 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 GLRBP48167 497 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 ERVK-21P61565 698 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 DLG1Q12959 904 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 SEMA3AQ14563 771 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 FAM45BPQ6NSW5 357 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 EFHBQ8N7U6 833 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 FAM45AQ8TCE6 357 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PPP4R1Q8TF05 950 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 MYO19Q96H55 970 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 SIKE1Q9BRV8 207 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 CHD9Q3L8U1 2897 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 GBF1Q92538 1859 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 TARM1B6A8C7 271 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 ZNF821O75541 412 aaPredicted RBP22.21■■□□□ 1.15
HMGA2-203ENST00000393578 SBK3P0C264 359 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PMLP29590 882 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PRKAA2P54646 552 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 ABCE1P61221 599 aaKnown RBP22.21■■□□□ 1.15
HMGA2-203ENST00000393578 BCL2L1Q07817 233 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 USP4Q13107 963 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 FAM83EQ2M2I3 478 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 CAMK1DQ8IU85 385 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 TTC30BQ8N4P2 665 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PIWIL2Q8TC59 973 aaKnown RBP22.21■■□□□ 1.15
HMGA2-203ENST00000393578 ZSWIM3Q96MP5 696 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 TCF12Q99081 682 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 BBS2Q9BXC9 721 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 MAGEE1Q9HCI5 957 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 GPAMQ9HCL2 828 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 SPHK2Q9NRA0 654 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 EVLQ9UI08 416 aaPredicted RBP22.21■■□□□ 1.15
HMGA2-203ENST00000393578 HS3ST2Q9Y278 367 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 CRYL1Q9Y2S2 319 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 CAPN7Q9Y6W3 813 aa22.21■■□□□ 1.15
HMGA2-203ENST00000393578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 NEDD8-MDP1E9PL57 170 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 SOCS5O75159 536 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 LYPLA1O75608 230 aaPredicted RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 DNAJC8O75937 253 aaPredicted RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 IGSF6O95976 241 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 SLC26A3P40879 764 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 RBM23Q86U06 439 aaKnown RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 MTDHQ86UE4 582 aaKnown RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 C10orf67Q8IYJ2 551 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 PIH1D2Q8WWB5 315 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 PPM1EQ8WY54 764 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 ISG20Q96AZ6 181 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms