RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ATAD3CQ5T2N8 411 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 SPATC1Q76KD6 591 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 GATAD2AQ86YP4 633 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 SPATA6LQ8N4H0 392 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 OR6F1Q8NGZ6 308 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 DYNC2LI1Q8TCX1 351 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 PHF10Q8WUB8 498 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 STYXQ8WUJ0 223 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 SDCCAG3Q96C92 435 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 TMEM246Q9BRR3 403 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 SNRNP25Q9BV90 132 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 OSBPL2Q9H1P3 480 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 HPS4Q9NQG7 708 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 DDX28Q9NUL7 540 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 XPR1Q9UBH6 696 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 POLLQ9UGP5 575 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 ZNF639Q9UID6 485 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 FBXO9Q9UK97 447 aaPredicted RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 PCDHB3Q9Y5E6 796 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 MAGED1Q9Y5V3 778 aaPredicted RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 C2CD4BA6NLJ0 364 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 C16orf96A6NNT2 1141 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 AREL1O15033 823 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 AGXTP21549 392 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 PCMT1P22061 227 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 ZNF135P52742 658 aaPredicted RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 CELF2-AS1Q8N7Q2 184 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 NETO2Q8NC67 525 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 FAM83FQ8NEG4 500 aaPredicted RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 VPS39Q96JC1 886 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 SNX18Q96RF0 628 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 NAT9Q9BTE0 207 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 NGRNQ9NPE2 291 aaKnown RBP17.14■□□□□ 0.33
PTPA-207ENST00000393370 CMTM6Q9NX76 183 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 ABCD2Q9UBJ2 740 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 PDE10AQ9Y233 779 aa17.14■□□□□ 0.33
PTPA-207ENST00000393370 TARM1B6A8C7 271 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 DAB1O75553 588 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 LDLRP01130 860 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 GH2P01242 217 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 NCK1P16333 377 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 YWHAQP27348 245 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 TNFAIP2Q03169 654 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 ESX1Q8N693 406 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 ANGPTL6Q8NI99 470 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 OSCP1Q8WVF1 389 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 HDAC2Q92769 488 aaKnown RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 SLC30A3Q99726 388 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 TARS2Q9BW92 718 aaKnown RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 CCDC90BQ9GZT6 254 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 PLEKHA5Q9HAU0 1116 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 TLK1Q9UKI8 766 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 NUDT5Q9UKK9 219 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 MFHAS1Q9Y4C4 1052 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 ERVH48-1M5A8F1 160 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 GPIP06744 558 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 POLD2P49005 469 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 NCS1P62166 190 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 GRM3Q14832 879 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 C6orf141Q5SZD1 244 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 RPS27LQ71UM5 84 aaKnown RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 IFNEQ86WN2 208 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 CHDHQ8NE62 594 aaPredicted RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 ROPN1LQ96C74 230 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 QKIQ96PU8 341 aaKnown RBP eCLIP17.13■□□□□ 0.334e-8■■■■□ 21.8
PTPA-207ENST00000393370 SEPHS2Q99611 448 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 DHRS9Q9BPW9 319 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 FBRSL1Q9HCM7 1045 aaKnown RBP17.13■□□□□ 0.33
PTPA-207ENST00000393370 TRIM39Q9HCM9 518 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 PLSCR3Q9NRY6 295 aa17.13■□□□□ 0.33
PTPA-207ENST00000393370 A0A0A0MRY4 1105 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 C9JVG2 144 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 TPPPO94811 219 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 HSD17B1P14061 328 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 TCF3P15923 654 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 CHRM3P20309 590 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 FSHRP23945 695 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 ASPAP45381 313 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 PPP2R2BQ00005 443 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 CTU2Q2VPK5 515 aaKnown RBP17.12■□□□□ 0.33
PTPA-207ENST00000393370 CCBE1Q6UXH8 406 aaPredicted RBP17.12■□□□□ 0.33
PTPA-207ENST00000393370 NEK10Q6ZWH5 1172 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 C8orf59Q8N0T1 100 aaPredicted RBP17.12■□□□□ 0.33
PTPA-207ENST00000393370 HTR3CQ8WXA8 447 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 SPATA13Q96N96 652 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 DEPDC7Q96QD5 511 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 LGMNQ99538 433 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 COQ7Q99807 217 aa17.12■□□□□ 0.33
PTPA-207ENST00000393370 SLIRPQ9GZT3 109 aaKnown RBP17.12■□□□□ 0.33
PTPA-207ENST00000393370 POLR3FQ9H1D9 316 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms