RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 PSIP1O75475 530 aaKnown RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 KLHL2O95198 593 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 PGM3O95394 542 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ZBED1O96006 694 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 PENKP01210 267 aaPredicted RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 EPB42P16452 691 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 HOXC8P31273 242 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ZNF135P52742 658 aaPredicted RBP8.15□□□□□ -1.11
LIMS1-203ENST00000393310 NFATC3Q12968 1075 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 PLA2G4EQ3MJ16 856 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 SMUG1Q53HV7 270 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CLVS2Q5SYC1 327 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 SULT1C3Q6IMI6 304 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 HID1Q8IV36 788 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 COG1Q8WTW3 980 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 RASSF5Q8WWW0 418 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 CASKIN2Q8WXE0 1202 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 SYBUQ9NX95 663 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 MPP6Q9NZW5 540 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 COMMD3-BMI1R4GMX3 469 aa8.15□□□□□ -1.11
LIMS1-203ENST00000393310 ATXN7O15265 892 aaPredicted RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 B4GALT5O43286 388 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PEX1O43933 1283 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TRIM3O75382 744 aaPredicted RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 KRT37O76014 449 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SUN1O94901 812 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 EGFP01133 1207 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ERVK-10P10266 1014 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 MTHFD1P11586 935 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 LCP1P13796 627 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 GTF2H1P32780 548 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 HSD17B2P37059 387 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 RPS21P63220 83 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 NECTIN1Q15223 517 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ZC2HC1CQ53FD0 456 aaPredicted RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TMEM196Q5HYL7 178 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CFAP161Q6P656 301 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 HDDC2Q7Z4H3 204 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 FAM129CQ86XR2 697 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 GPATCH1Q9BRR8 931 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PACSIN1Q9BY11 444 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 DNAJC25Q9H1X3 360 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PIH1D1Q9NWS0 290 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 MBD1Q9UIS9 605 aaPredicted RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PLAAQ9Y263 795 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 IGKV6-21A0A0C4DH24 114 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 F13A1P00488 732 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 WARSP23381 471 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 NR2F2P24468 414 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 DNAJB1P25685 340 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 GSTT1P30711 240 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CCR5P51681 352 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TKTL1P51854 596 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SLC7A9P82251 487 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TRAP1Q12931 704 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CAPRIN1Q14444 709 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 C3orf38Q5JPI3 329 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 DCAF12Q5T6F0 453 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PYHIN1Q6K0P9 492 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ERICH1Q86X53 443 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 MFSD2AQ8NA29 543 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CATSPER1Q8NEC5 780 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SGCDQ92629 289 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PPP1R2P1Q96PQ5 205 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CINPQ9BW66 212 aaPredicted RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 NOD2Q9HC29 1040 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ATP13A1Q9HD20 1204 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 KRT84Q9NSB2 600 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 FAM49BQ9NUQ9 324 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 NDOR1Q9UHB4 597 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 MAPK8IP1Q9UQF2 711 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CAPN14A8MX76 684 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 RASGRF2O14827 1237 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SCAMP3O14828 347 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TM7SF2O76062 418 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 VIPP01282 170 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 CYP2F1P24903 491 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 HSPA13P48723 471 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TAS2R50P59544 299 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SHC2P98077 582 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SNRNP35Q16560 246 aaKnown RBP8.14□□□□□ -1.11
LIMS1-203ENST00000393310 C11orf88Q6PI97 169 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 DHRS13Q6UX07 377 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 VSIG1Q86XK7 387 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 SCUBE1Q8IWY4 988 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 ASZ1Q8WWH4 475 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 TBC1D20Q96BZ9 403 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PPP1R13BQ96KQ4 1090 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 HEPHQ9BQS7 1158 aa8.14□□□□□ -1.11
LIMS1-203ENST00000393310 PCMTD2Q9NV79 361 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms