RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF471Q9BX82 626 aaPredicted RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 GPATCH2LQ9NWQ4 482 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 ZSCAN5CA6NGD5 496 aaPredicted RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 ZNF12P17014 697 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 CLK2P49760 499 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 ANTXR2P58335 489 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 RPA3P35244 121 aaPredicted RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 MREGQ8N565 214 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 ANKRD7Q92527 254 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 SPG21Q9NZD8 308 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 OR10H3O60404 316 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 CYP11B2P19099 503 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 PTPN9P43378 593 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 RPL14P50914 215 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 LARS2Q15031 903 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 PTAR1Q7Z6K3 402 aaPredicted RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 BPIFB6Q8NFQ5 453 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 DCAKDQ8WVC6 231 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 MRPL9Q9BYD2 267 aaKnown RBP14.77□□□□□ -0.04
CCDC50-201ENST00000392455 MAGEL2Q9UJ55 1249 aa14.77□□□□□ -0.04
CCDC50-201ENST00000392455 DBTP11182 482 aaKnown RBP14.77□□□□□ -0.05
CCDC50-201ENST00000392455 CRY1Q16526 586 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 TIGD4Q8IY51 512 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 C2orf49Q9BVC5 232 aaPredicted RBP14.77□□□□□ -0.05
CCDC50-201ENST00000392455 PCDHB16Q9NRJ7 776 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC50-201ENST00000392455 POC1BQ8TC44 478 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 SELENOMQ8WWX9 145 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 SMARCD1Q96GM5 515 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 ZDHHC15Q96MV8 337 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 METTL8Q9H825 291 aaKnown RBP14.77□□□□□ -0.05
CCDC50-201ENST00000392455 PEX16Q9Y5Y5 336 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 MYH7BA7E2Y1 1941 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 GRIN2DO15399 1336 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 NDUFS2O75306 463 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 IFNA21P01568 189 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 SRCP12931 536 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 GNALP38405 381 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 ST3GAL1Q11201 340 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 TAF5Q15542 800 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 SOHLH2Q9NX45 425 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 MOCS1Q9NZB8 636 aa14.77□□□□□ -0.05
CCDC50-201ENST00000392455 INO80Q9ULG1 1556 aaPredicted RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 BCL2L1Q07817 233 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ZC3HC1Q86WB0 502 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 FAM98AQ8NCA5 519 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 BHLHE22Q8NFJ8 381 aaPredicted RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 TSEN15Q8WW01 171 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 TSHRP16473 764 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SDR16C5Q8N3Y7 309 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 DPF3Q92784 378 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SAMHD1Q9Y3Z3 626 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 GRK5P34947 590 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 MFSD10Q14728 455 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ARMC12Q5T9G4 340 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 MRPL57Q9BQC6 102 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 OR2AT4A6NND4 320 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 CLPXO76031 633 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 PARNO95453 639 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SYVN1Q86TM6 617 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF709Q8N972 641 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 NOA1Q8NC60 698 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 AGBL3Q8NEM8 1001 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 CITED4Q96RK1 184 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 GPR75-ASB3A0A0A6YYF3 556 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 OTCP00480 354 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ARHGAP36Q6ZRI8 547 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 NSMCE3Q96MG7 304 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 RNPEPL1Q9HAU8 725 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 NTSR2O95665 410 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SPIBQ01892 262 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ELP6Q0PNE2 266 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ADNP2Q6IQ32 1131 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF285Q96NJ3 590 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 DNAJC11Q9NVH1 559 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 PAPSS2O95340 614 aaPredicted RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 CSF1RP07333 972 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 RPS2P15880 293 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 EPORP19235 508 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 DNASE1L1P49184 302 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 STXBP1P61764 594 aaKnown RBP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 PCBP1Q15365 356 aaKnown RBP eCLIP14.76□□□□□ -0.05
CCDC50-201ENST00000392455 MED22Q15528 200 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 AADACL4Q5VUY2 407 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 FAAH2Q6GMR7 532 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF227Q86WZ6 799 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SLC44A3Q8N4M1 653 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 OR52K2Q8NGK3 314 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SYT4Q9H2B2 425 aa14.76□□□□□ -0.05
CCDC50-201ENST00000392455 SNRPD1P62314 119 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 N4BP2L1Q5TBK1 243 aaPredicted RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF613Q6PF04 617 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 YTHDF3Q7Z739 585 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 KBTBD2Q8IY47 623 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 TMEM176AQ96HP8 235 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms