RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 KCNN2Q9H2S1 579 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 MKKSQ9NPJ1 570 aaPredicted RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 BABAM1Q9NWV8 329 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 HSF4Q9ULV5 492 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 GAB2Q9UQC2 676 aa3.32□□□□□ -1.88
TRAV40-201ENST00000390467 ATXN2Q99700 1313 aaKnown RBP3.32□□□□□ -1.88
TRAV40-201ENST00000390467 PDS5AQ29RF7 1337 aaKnown RBP3.31□□□□□ -1.88
TRAV40-201ENST00000390467 FAM172BPA6NC97 362 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 TSPAN3O60637 253 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 TIPRLO75663 272 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 TCEA3O75764 348 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 LDHAP00338 332 aaKnown RBP3.31□□□□□ -1.88
TRAV40-201ENST00000390467 URODP06132 367 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 HEXAP06865 529 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 FGF5P12034 268 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 CDH1P12830 882 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 ITGA2P17301 1181 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 AGAP20933 346 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 ANOS1P23352 680 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 MCM3P25205 808 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 TIMP3P35625 211 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 CCR5P51681 352 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 EFNB1P98172 346 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 ITGADQ13349 1161 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 CEP85LQ5SZL2 805 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 ADAM5Q6NVV9 412 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 BBS12Q6ZW61 710 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 TMEM219Q86XT9 240 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 SCCPDHQ8NBX0 429 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 AGBL3Q8NEM8 1001 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 DUSP19Q8WTR2 217 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 FBXL8Q96CD0 374 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 BBS4Q96RK4 519 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 SIN3AQ96ST3 1273 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 KXD1Q9BQD3 176 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 FBRSL1Q9HCM7 1045 aaKnown RBP3.31□□□□□ -1.88
TRAV40-201ENST00000390467 SCRT2Q9NQ03 307 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 IL1RAPL1Q9NZN1 696 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 HSPB7Q9UBY9 170 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 STON1Q9Y6Q2 735 aa3.31□□□□□ -1.88
TRAV40-201ENST00000390467 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 TACC1O75410 805 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 MMP2P08253 660 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 CETPP11597 493 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 CD58P19256 250 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 LINC01547P58512 204 aaPredicted RBP3.3□□□□□ -1.88
TRAV40-201ENST00000390467 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
TRAV40-201ENST00000390467 NEDD9Q14511 834 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 CTF1Q16619 201 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 ATG16L1Q676U5 607 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 FAM122CQ6P4D5 195 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 FBXO46Q6PJ61 603 aaPredicted RBP3.3□□□□□ -1.88
TRAV40-201ENST00000390467 C19orf48Q6RUI8 117 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 TRMT1LQ7Z2T5 733 aaKnown RBP3.3□□□□□ -1.88
TRAV40-201ENST00000390467 TADA2BQ86TJ2 420 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 TDRPQ86YL5 185 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 EPHX4Q8IUS5 362 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 CPOQ8IVL8 374 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 DSELQ8IZU8 1212 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 OR13A1Q8NGR1 328 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 SLC20A1Q8WUM9 679 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 WBP1Q96G27 269 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 ARPC5LQ9BPX5 153 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 C20orf141Q9NUB4 165 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 ABCF3Q9NUQ8 709 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 TAAR2Q9P1P5 351 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 RCOR1Q9UKL0 485 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 RALYQ9UKM9 306 aaKnown RBP3.3□□□□□ -1.88
TRAV40-201ENST00000390467 GPR52Q9Y2T5 361 aa3.3□□□□□ -1.88
TRAV40-201ENST00000390467 FGF17O60258 216 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 PIP5K1CO60331 668 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 MTA2O94776 668 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ATP1A1P05023 1023 aaKnown RBP3.29□□□□□ -1.88
TRAV40-201ENST00000390467 GALTP07902 379 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 S1PR1P21453 382 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 POU1F1P28069 291 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 SHMT1P34896 483 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 VEPH1Q14D04 833 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 TAF11Q15544 211 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 SYT16Q17RD7 645 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 C2orf68Q2NKX9 166 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ACCSLQ4AC99 568 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF766Q5HY98 468 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 STXBP5Q5T5C0 1151 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 PLA2G4FQ68DD2 849 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 TMEM81Q6P7N7 255 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 SLC36A4Q6YBV0 504 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 LDHAL6AQ6ZMR3 332 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 SLC26A9Q7LBE3 791 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 WDR63Q8IWG1 891 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 SPATA5Q8NB90 893 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ABTB1Q969K4 478 aaPredicted RBP3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ALG14Q96F25 216 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 GLIS2Q9BZE0 524 aaPredicted RBP3.29□□□□□ -1.88
TRAV40-201ENST00000390467 TKTL2Q9H0I9 626 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 PLEKHA5Q9HAU0 1116 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 MAGEE1Q9HCI5 957 aa3.29□□□□□ -1.88
TRAV40-201ENST00000390467 ZNF334Q9HCZ1 680 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms