RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 POMKQ9H5K3 350 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CCDC162PA2VCL2 907 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 WDR91A4D1P6 747 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ANTXRLA6NF34 631 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 PRRT4C9JH25 899 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ASMTLO95671 621 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CRTAMO95727 393 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 GOT2P00505 430 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 IGFBP4P22692 258 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CSNK1DP48730 415 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 NEK3P51956 506 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF140P52738 457 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CSE1LP55060 971 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 PDE1CQ14123 709 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 RALGPS1Q5JS13 557 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 CNSTQ6PJW8 725 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 METTL3Q86U44 580 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 MFSD6LQ8IWD5 586 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 C2CD4AQ8NCU7 369 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ISG20Q96AZ6 181 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ALKBH8Q96BT7 664 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM161BQ96MY7 647 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM111AQ96PZ2 611 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 ATP13A3Q9H7F0 1226 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 SNX15Q9NRS6 342 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 THG1LQ9NWX6 298 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 FBXO5Q9UKT4 447 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC39A10Q9ULF5 831 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 COL4A3Q01955 1670 aa12.23□□□□□ -0.45
SPTBN1-203ENST00000389980 TCF20Q9UGU0 1960 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 HTRA2O43464 458 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SIN3BO75182 1162 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 RPP40O75818 363 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 UGT2B4P06133 528 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 LAMP2P13473 410 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 TYK2P29597 1187 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 FOXN2P32314 431 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 CCNFP41002 786 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 ACVR1Q04771 509 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 PTPRNQ16849 979 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 LRRC73Q5JTD7 316 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 HHATQ5VTY9 493 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 PCDH20Q8N6Y1 951 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 OR2A12Q8NGT7 310 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 GRIN3AQ8TCU5 1115 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 STYXQ8WUJ0 223 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 EID2BQ96D98 161 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 CDKN2AIPNLQ96HQ2 116 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SGSM3Q96HU1 749 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 FAM167BQ9BTA0 163 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 NLE1Q9NVX2 485 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 POLR3BQ9NW08 1133 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 OBP2AQ9NY56 170 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC7A4O43246 635 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 ZWINTO95229 277 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SERPINA4P29622 427 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 FCHO2Q0JRZ9 810 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SEMA3AQ14563 771 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SEPT7Q16181 437 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 LYSMD3Q7Z3D4 306 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 CILP2Q8IUL8 1156 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC41A1Q8IVJ1 513 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 FRS2Q8WU20 508 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 VPS11Q9H270 941 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 RHOJQ9H4E5 214 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 ZDHHC4Q9NPG8 344 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF358Q9NW07 568 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 DEC1Q9P2X7 70 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF711Q9Y462 761 aa12.22□□□□□ -0.45
SPTBN1-203ENST00000389980 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 TIMM44O43615 452 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 GSRP00390 522 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 LPOP22079 712 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 GDI1P31150 447 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 MAPK8P45983 427 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 GRIA4P48058 902 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 CDKN1CP49918 316 aaPredicted RBP12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 SLC18A1P54219 525 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 IRX4P78413 519 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 IRF9Q00978 393 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 RUNX3Q13761 415 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 ZNF460Q14592 562 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 ARMC3Q5W041 872 aa12.21□□□□□ -0.45
SPTBN1-203ENST00000389980 C16orf46Q6P387 395 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms