RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CCDC58Q4VC31 144 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 SPANXN3Q5MJ09 141 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 SCYL2Q6P3W7 929 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 LBX2Q6XYB7 198 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 BPHLQ86WA6 291 aaPredicted RBP14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 PIK3C3Q8NEB9 887 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 CXorf38Q8TB03 319 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 STYXQ8WUJ0 223 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 MED30Q96HR3 178 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 MRGBPQ9NV56 204 aa14.71□□□□□ -0.06
VPS9D1-201ENST00000389386 MCM3APO60318 1980 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 TTC24A2A3L6 582 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 K7ERI5 159 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 GJB1P08034 283 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 CRHBPP24387 322 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 ECT2LQ008S8 904 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 SKIV2LQ15477 1246 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 LCN8Q6JVE9 175 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 R3HCC1LQ7Z5L2 792 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 ZBTB33Q86T24 672 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 CDR2LQ86X02 465 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 OR6Q1Q8NGQ2 317 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 VPS33AQ96AX1 596 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 CDHR1Q96JP9 859 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 MTMR12Q9C0I1 747 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 RETREG1Q9H6L5 497 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 EGFL7Q9UHF1 273 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 TARM1B6A8C7 271 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 RNF103O00237 685 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 AXIN1O15169 862 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 UBDO15205 165 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 DLX3O60479 287 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 ARIH2O95376 493 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 NTRK1P04629 796 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 RFC2P35250 354 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 ASPAP45381 313 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 GJA9P57773 515 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 COPZ1P61923 177 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 PHC1P78364 1004 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 SLC13A2Q13183 592 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 PMF1Q6P1K2 205 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 LACC1Q8IV20 430 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 SIX5Q8N196 739 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 LRRC71Q8N4P6 559 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 CCNYL1Q8N7R7 359 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 SLC10A4Q96EP9 437 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 EGLN2Q96KS0 407 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 EMILIN2Q9BXX0 1053 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 TXNRD2Q9NNW7 524 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 CRNNQ9UBG3 495 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 ZNF639Q9UID6 485 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 PMF1-BGLAPU3KQ54 211 aa14.7□□□□□ -0.06
VPS9D1-201ENST00000389386 GPC4O75487 556 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 PIGRP01833 764 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 HTR1AP08908 422 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 VDRP11473 427 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 FCGR1AP12314 374 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 CDH1P12830 882 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 PRKCAP17252 672 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 CYP2F1P24903 491 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 GLRBP48167 497 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 WDR45BQ5MNZ6 344 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 HEATR6Q6AI08 1181 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 TBPL2Q6SJ96 375 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 TMEM130Q8N3G9 435 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 COLGALT1Q8NBJ5 622 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 TRAPPC12Q8WVT3 735 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 HTRA1Q92743 480 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 MUL1Q969V5 352 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 ZNF670Q9BS34 389 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 SPATC1LQ9H0A9 340 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 MAFBQ9Y5Q3 323 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 A0A0A0MRY4 1105 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 GABBR2O75899 941 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 CSRP3P50461 194 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 HIST2H2ACQ16777 129 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 PPP1R3AQ16821 1122 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 RBM48Q5RL73 367 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 UBE2UQ5VVX9 321 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 NEK10Q6ZWH5 1172 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 OR9I1Q8NGQ6 314 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 SLC22A17Q8WUG5 538 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 COPS5Q92905 334 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 SCYL1Q96KG9 808 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 SPATA13Q96N96 652 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 SNRNP25Q9BV90 132 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 DGCR6LQ9BY27 220 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 ING2Q9H160 280 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 LRRC40Q9H9A6 602 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 EIF2B3Q9NR50 452 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 ACTR3BQ9P1U1 418 aa14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 MTF2Q9Y483 593 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-201ENST00000389386 TOMM70O94826 608 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 KCNK2O95069 426 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CELF2O95319 508 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 NADKO95544 446 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms