RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TNFRSF10CO14798 259 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 KDELR3O43731 214 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 DDAH2O95865 285 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 CSF2RBP32927 897 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 MAN1A1P33908 653 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 TSPAN7P41732 249 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 STAT1P42224 750 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 GPR3P46089 330 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 GNPDA1P46926 289 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 MAPKAPK2P49137 400 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 SUOXP51687 545 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 ATP11AP98196 1134 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 MC2RQ01718 297 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 PTK2Q05397 1052 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 STIM1Q13586 685 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 TMEM71Q6P5X7 295 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 ZNF438Q7Z4V0 828 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 NRROSQ86YC3 692 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 CREBRFQ8IUR6 639 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 PRR7Q8TB68 274 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 TEFMQ96QE5 360 aaKnown RBP9.67□□□□□ -0.86
IFT88-203ENST00000389373 CRACR2AQ9BSW2 395 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 MAGEB5Q9BZ81 275 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 SCAND2PQ9GZW5 306 aaPredicted RBP9.67□□□□□ -0.86
IFT88-203ENST00000389373 TRIT1Q9H3H1 467 aaKnown RBP9.67□□□□□ -0.86
IFT88-203ENST00000389373 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
IFT88-203ENST00000389373 OR12D3Q9UGF7 316 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.67□□□□□ -0.86
IFT88-203ENST00000389373 RPS6KL1Q9Y6S9 549 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 MYO9AB2RTY4 2548 aa9.67□□□□□ -0.86
IFT88-203ENST00000389373 NOTCH2Q04721 2471 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 FAM237AA0A1B0GTK4 181 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 CDC14CA4D256 554 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 FAM72CH0Y354 149 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 PSMA7O14818 248 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 RFPL1O75677 317 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 CLDN1O95832 211 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 PDGFAP04085 211 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 FURINP09958 794 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 RHOQP17081 205 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 F8A1P23610 371 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ELAVL4P26378 380 aaKnown RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 FLT3P36888 993 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 DLSTP36957 453 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 KRT85P78386 507 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 APBA1Q02410 837 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 NR1D2Q14995 579 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ACOX1Q15067 660 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 CDO1Q16878 200 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 RAB6CQ53S08 254 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 COBLL1Q53SF7 1204 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 C2CD6Q53TS8 623 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 FAM72AQ5TYM5 149 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 FAM72DQ6L9T8 149 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 PNCKQ6P2M8 343 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 TMEM135Q86UB9 458 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 C17orf82Q86X59 251 aaPredicted RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 FAM72BQ86X60 149 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ZDHHC17Q8IUH5 632 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 NAGSQ8N159 534 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 PELI3Q8N2H9 469 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 NCSTNQ92542 709 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 SMARCE1Q969G3 411 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 NT5C3BQ969T7 300 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 C18orf8Q96DM3 657 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 DPYSL5Q9BPU6 564 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 SPRY4Q9C004 299 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 KLC2Q9H0B6 622 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 RAB6CQ9H0N0 254 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 WDR26Q9H7D7 661 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 TMEM248Q9NWD8 314 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 KLHL3Q9UH77 587 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 POLHQ9Y253 713 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 ATP8A1Q9Y2Q0 1164 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 MFHAS1Q9Y4C4 1052 aa9.66□□□□□ -0.86
IFT88-203ENST00000389373 OAS3Q9Y6K5 1087 aaKnown RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 SPTAN1Q13813 2472 aaKnown RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 UTP20O75691 2785 aaKnown RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 USP9YO00507 2555 aaPredicted RBP9.66□□□□□ -0.86
IFT88-203ENST00000389373 NBASA2RRP1 2371 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 CXorf51AA0A1B0GTR3 108 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 GOLGA6CA6NDK9 693 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 GOLGA6BA6NDN3 693 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 ZSCAN5CA6NGD5 496 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 POLR1CO15160 346 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 INPP4BO15327 924 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 BUB1BO60566 1050 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 SMC2O95347 1197 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 GOLGA6DP0CG33 693 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 SLC9A1P19634 815 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 BMP6P22004 513 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 MMP12P39900 470 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 STAT5AP42229 794 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms