RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ACAP2Q15057 778 aa15.03■□□□□ -0
CTNS-202ENST00000381870 PRR23BQ6ZRT6 265 aa15.03■□□□□ -0
CTNS-202ENST00000381870 IFNEQ86WN2 208 aa15.03■□□□□ -0
CTNS-202ENST00000381870 CLEC4CQ8WTT0 213 aa15.03■□□□□ -0
CTNS-202ENST00000381870 S100ZQ8WXG8 99 aa15.03■□□□□ -0
CTNS-202ENST00000381870 ROPN1LQ96C74 230 aa15.03■□□□□ -0
CTNS-202ENST00000381870 VMP1Q96GC9 406 aa15.03■□□□□ -0
CTNS-202ENST00000381870 ARPC5LQ9BPX5 153 aa15.03■□□□□ -0
CTNS-202ENST00000381870 MRPL4Q9BYD3 311 aaKnown RBP15.03■□□□□ -0
CTNS-202ENST00000381870 ALOXE3Q9BYJ1 711 aa15.03■□□□□ -0
CTNS-202ENST00000381870 LRRC4Q9HBW1 653 aa15.03■□□□□ -0
CTNS-202ENST00000381870 ABCD2Q9UBJ2 740 aa15.03■□□□□ -0
CTNS-202ENST00000381870 USP3Q9Y6I4 520 aa15.03■□□□□ -0
CTNS-202ENST00000381870 TRIP11Q15643 1979 aa15.03■□□□□ -0
CTNS-202ENST00000381870 TNFRSF10AO00220 468 aa15.03■□□□□ -0
CTNS-202ENST00000381870 MAN1A2O60476 641 aa15.03■□□□□ -0
CTNS-202ENST00000381870 GABBR2O75899 941 aa15.03■□□□□ -0
CTNS-202ENST00000381870 INMTO95050 263 aa15.03■□□□□ -0
CTNS-202ENST00000381870 NFICP08651 508 aa15.03■□□□□ -0
CTNS-202ENST00000381870 SUPT20HL2P0C7V6 817 aa15.03■□□□□ -0
CTNS-202ENST00000381870 KCNA5P22460 613 aa15.03■□□□□ -0
CTNS-202ENST00000381870 SERPINB1P30740 379 aa15.03■□□□□ -0
CTNS-202ENST00000381870 NDST1P52848 882 aa15.03■□□□□ -0
CTNS-202ENST00000381870 LSM3P62310 102 aaKnown RBP15.03■□□□□ -0
CTNS-202ENST00000381870 CBX2Q14781 532 aaPredicted RBP15.03■□□□□ -0
CTNS-202ENST00000381870 GEN1Q17RS7 908 aa15.03■□□□□ -0
CTNS-202ENST00000381870 GOLGA7BQ2TAP0 167 aa15.03■□□□□ -0
CTNS-202ENST00000381870 SUPT20HL1Q3ZLR7 823 aa15.03■□□□□ -0
CTNS-202ENST00000381870 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
CTNS-202ENST00000381870 CLEC6AQ6EIG7 209 aa15.03■□□□□ -0
CTNS-202ENST00000381870 PIWIL4Q7Z3Z4 852 aaKnown RBP15.03■□□□□ -0
CTNS-202ENST00000381870 PODNQ7Z5L7 613 aa15.03■□□□□ -0
CTNS-202ENST00000381870 MFSD6LQ8IWD5 586 aa15.03■□□□□ -0
CTNS-202ENST00000381870 KIAA2013Q8IYS2 634 aa15.03■□□□□ -0
CTNS-202ENST00000381870 NDNFQ8TB73 568 aa15.03■□□□□ -0
CTNS-202ENST00000381870 MAGED4Q96JG8 741 aa15.03■□□□□ -0
CTNS-202ENST00000381870 RHOBTB2Q9BYZ6 727 aa15.03■□□□□ -0
CTNS-202ENST00000381870 TRIT1Q9H3H1 467 aaKnown RBP15.03■□□□□ -0
CTNS-202ENST00000381870 INTS10Q9NVR2 710 aaKnown RBP15.03■□□□□ -0
CTNS-202ENST00000381870 BAG5Q9UL15 447 aa15.03■□□□□ -0
CTNS-202ENST00000381870 ACOT9Q9Y305 439 aa15.03■□□□□ -0
CTNS-202ENST00000381870 BPTFQ12830 3046 aa15.02■□□□□ -0
CTNS-202ENST00000381870 ALDOCP09972 364 aaKnown RBP15.02■□□□□ -0
CTNS-202ENST00000381870 CXCL8P10145 99 aa15.02■□□□□ -0
CTNS-202ENST00000381870 CD68P34810 354 aaPredicted RBP15.02■□□□□ -0
CTNS-202ENST00000381870 ECT2LQ008S8 904 aa15.02■□□□□ -0
CTNS-202ENST00000381870 FPGSQ05932 587 aa15.02■□□□□ -0
CTNS-202ENST00000381870 E2F2Q14209 437 aa15.02■□□□□ -0
CTNS-202ENST00000381870 STRIP1Q5VSL9 837 aa15.02■□□□□ -0
CTNS-202ENST00000381870 TMEM236Q5W0B7 351 aa15.02■□□□□ -0
CTNS-202ENST00000381870 CATSPER4Q7RTX7 472 aa15.02■□□□□ -0
CTNS-202ENST00000381870 CUZD1Q86UP6 607 aa15.02■□□□□ -0
CTNS-202ENST00000381870 ELMOD1Q8N336 334 aa15.02■□□□□ -0
CTNS-202ENST00000381870 DNERQ8NFT8 737 aa15.02■□□□□ -0
CTNS-202ENST00000381870 CALML6Q8TD86 181 aa15.02■□□□□ -0
CTNS-202ENST00000381870 ZNF668Q96K58 619 aaPredicted RBP15.02■□□□□ -0
CTNS-202ENST00000381870 SEPHS2Q99611 448 aa15.02■□□□□ -0
CTNS-202ENST00000381870 SLC30A3Q99726 388 aa15.02■□□□□ -0
CTNS-202ENST00000381870 PRDM12Q9H4Q4 367 aa15.02■□□□□ -0
CTNS-202ENST00000381870 C8orf4Q9NR00 106 aa15.02■□□□□ -0
CTNS-202ENST00000381870 TMPRSS4Q9NRS4 437 aa15.02■□□□□ -0
CTNS-202ENST00000381870 GMIPQ9P107 970 aa15.02■□□□□ -0
CTNS-202ENST00000381870 MAGED1Q9Y5V3 778 aaPredicted RBP15.02■□□□□ -0
CTNS-202ENST00000381870 PMF1-BGLAPU3KQ54 211 aa15.02■□□□□ -0
CTNS-202ENST00000381870 A0A0J9YYE9 177 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 H0YAE9 185 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 FXYD1O00168 92 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 NADKO95544 446 aaPredicted RBP15.02□□□□□ -0.01
CTNS-202ENST00000381870 AHSGP02765 367 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 HSD17B1P14061 328 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 GPX3P22352 226 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 PLK1P53350 603 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 SURF1Q15526 300 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 ZNF280DQ6N043 979 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 LCLAT1Q6UWP7 414 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 CYHR1Q6ZMK1 362 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 GALNT13Q8IUC8 556 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 ARMC8Q8IUR7 673 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 UPF1Q92900 1129 aaKnown RBP eCLIP15.02□□□□□ -0.019e-11■■■■■ 39.4
CTNS-202ENST00000381870 RHOJQ9H4E5 214 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 SLC38A10Q9HBR0 1119 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 SPON1Q9HCB6 807 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 KLHL8Q9P2G9 620 aaPredicted RBP15.02□□□□□ -0.01
CTNS-202ENST00000381870 GIMAP2Q9UG22 337 aa15.02□□□□□ -0.01
CTNS-202ENST00000381870 ZFC3H1O60293 1989 aaKnown RBP15.02□□□□□ -0.01
CTNS-202ENST00000381870 KIAA1217Q5T5P2 1943 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 TCRBV5S2A0A599 114 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 ILVBLA1L0T0 632 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 LDLRP01130 860 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 GPIP06744 558 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 ENO2P09104 434 aaPredicted RBP15.01□□□□□ -0.01
CTNS-202ENST00000381870 FCGR1AP12314 374 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 TSPAN8P19075 237 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 CAPN3P20807 821 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 SLC6A2P23975 617 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 GP2P55259 537 aaKnown RBP15.01□□□□□ -0.01
CTNS-202ENST00000381870 BNIP2Q12982 314 aa15.01□□□□□ -0.01
CTNS-202ENST00000381870 FRG1Q14331 258 aaKnown RBP15.01□□□□□ -0.01
CTNS-202ENST00000381870 SKIV2LQ15477 1246 aaKnown RBP15.01□□□□□ -0.01
CTNS-202ENST00000381870 KIF19Q2TAC6 998 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms