RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 AP4B1Q9Y6B7 739 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 COL1A2P08123 1366 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 LCA5LO95447 670 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SEC24AO95486 1093 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 STAT5AP42229 794 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CERCAMQ5T4B2 595 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SDHAF4Q5VUM1 108 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 MZT2BQ6NZ67 158 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 GPR156Q8NFN8 814 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 OR52E6Q96RD3 313 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 EPB41L1Q9H4G0 881 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CAB39LQ9H9S4 337 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 WFS1O76024 890 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 PSMD5Q16401 504 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 ZSWIM7Q19AV6 140 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 TIGD2Q4W5G0 525 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 IRAK1BP1Q5VVH5 260 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 IKBIPQ70UQ0 350 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 XYLT1Q86Y38 959 aa16.08■□□□□ 0.17
COL2A1-202ENST00000380518 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.08■□□□□ 0.17
COL2A1-202ENST00000380518 HOPXQ9BPY8 73 aaPredicted RBP16.08■□□□□ 0.17
COL2A1-202ENST00000380518 CCDC189A1A4V9 331 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 NRP2O60462 931 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 CILPO75339 1184 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 C16orf62Q7Z3J2 963 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 PROSER1Q86XN7 944 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 IKZF4Q9H2S9 585 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 CCNE2O96020 404 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 CTPS1P17812 591 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 FOLH1Q04609 750 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 NDUFAF6Q330K2 333 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 KLHL5Q96PQ7 755 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 TMPRSS4Q9NRS4 437 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 MAGEL2Q9UJ55 1249 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
COL2A1-202ENST00000380518 SMIM35A0A1B0GVV1 85 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 LRCH4O75427 683 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
COL2A1-202ENST00000380518 ANXA8L1Q5VT79 327 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 CLNKQ7Z7G1 428 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 HIPK1Q86Z02 1210 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 SPPL2BQ8TCT7 592 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 BRD9Q9H8M2 597 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 CCNB1IP1Q9NPC3 277 aa16.08■□□□□ 0.16
COL2A1-202ENST00000380518 ADH1AP07327 375 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 BRCC3P46736 316 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 ABRQ12979 859 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 GSTCDQ8NEC7 633 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 CXorf40BQ96DE9 158 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 ARL8BQ9NVJ2 186 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 PQLC1Q8N2U9 271 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 SMYD1Q8NB12 490 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 WDR60Q8WVS4 1066 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 ZHX1-C8orf76Q96EF9 292 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 CLK4Q9HAZ1 481 aaKnown RBP16.07■□□□□ 0.16
COL2A1-202ENST00000380518 HBS1LQ9Y450 684 aaKnown RBP16.07■□□□□ 0.16
COL2A1-202ENST00000380518 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 SERPINB7O75635 380 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 NOL4O94818 638 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 HIST1H2ABP04908 130 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 KLF10Q13118 480 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 MTAPQ13126 283 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 TCEA2Q15560 299 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 PMF1Q6P1K2 205 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 HIST3H2AQ7L7L0 130 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 KRT74Q7RTS7 529 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 PLD5Q8N7P1 536 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 NETO2Q8NC67 525 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 HIST1H2ACQ93077 130 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 URADA6NGE7 173 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 PPP1R11O60927 126 aaPredicted RBP16.07■□□□□ 0.16
COL2A1-202ENST00000380518 C4BPAP04003 597 aaKnown RBP16.07■□□□□ 0.16
COL2A1-202ENST00000380518 SMARCB1Q12824 385 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 PTP4A2Q12974 167 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 NDUFA5Q16718 116 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 LSM12Q3MHD2 195 aaKnown RBP16.07■□□□□ 0.16
COL2A1-202ENST00000380518 HSDL1Q3SXM5 330 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 MON1BQ7L1V2 547 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 TBC1D21Q8IYX1 336 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 BSNDQ8WZ55 320 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 SPACA7Q96KW9 195 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 GPR20Q99678 358 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 EGFL7Q9UHF1 273 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 AK5Q9Y6K8 562 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 STON1Q9Y6Q2 735 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
COL2A1-202ENST00000380518 SMIM28A0A1B0GU29 152 aa16.06■□□□□ 0.16
COL2A1-202ENST00000380518 CLDN11O75508 207 aa16.06■□□□□ 0.16
COL2A1-202ENST00000380518 UGT2B15P54855 530 aa16.06■□□□□ 0.16
COL2A1-202ENST00000380518 COL9A3Q14050 684 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms