RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CDKN2AIPNLQ96HQ2 116 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 TRMOQ9BU70 441 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 HACD3Q9P035 362 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 ZNF510Q9Y2H8 683 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 KCTD3Q9Y597 815 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 ARL5AQ9Y689 179 aa23.16■■□□□ 1.3
VPS16-201ENST00000380443 GOLGA8QA0A0J9YX86 632 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 GOLGA8OA6NCC3 632 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 GOLGA8NF8WBI6 632 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 CBX4O00257 560 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 KIAA0355O15063 1070 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 CIB2O75838 187 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 IPO13O94829 963 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 CHRNGP07510 517 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 SYN1P17600 705 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 NCF2P19878 526 aaPredicted RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 MPSTP25325 297 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 ZNF140P52738 457 aaPredicted RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 MXRA7P84157 204 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 E2F5Q15329 346 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 TRIM67Q6ZTA4 783 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 SCUBE1Q8IWY4 988 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 LSMEM2Q8N112 164 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 USP13Q92995 863 aaPredicted RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 MARCH4Q9P2E8 410 aaPredicted RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 L3MBTL1Q9Y468 752 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 GFRA2O00451 464 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 ANP32DO95626 131 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 C1RP00736 705 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 IRF1P10914 325 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 RAG1P15918 1043 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 STC1P52823 247 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 SMAD3P84022 425 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 SATB1Q01826 763 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 ZRSR2Q15696 482 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 TRMT5Q32P41 509 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 SLC9B1Q4ZJI4 515 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 VWA5B1Q5TIE3 1220 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 FAM217AQ8IXS0 508 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 CPSF7Q8N684 471 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 TXNDC5Q8NBS9 432 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 RMDN1Q96DB5 314 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 ZFRQ96KR1 1074 aaKnown RBP23.15■■□□□ 1.3
VPS16-201ENST00000380443 POMKQ9H5K3 350 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 CDYLQ9Y232 598 aa23.15■■□□□ 1.3
VPS16-201ENST00000380443 PDE4DIPQ5VU43 2346 aa23.14■■□□□ 1.3
VPS16-201ENST00000380443 H0Y626 953 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 TSPAN3O60637 253 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 PMLP29590 882 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 CPA2P48052 419 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 SGSHP51688 502 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 NAA25Q14CX7 972 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 TMEM150AQ86TG1 271 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 LBHD1Q9BQE6 289 aaPredicted RBP23.14■■□□□ 1.29
VPS16-201ENST00000380443 ZDHHC2Q9UIJ5 367 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 ANAPC1Q9H1A4 1944 aa23.14■■□□□ 1.29
VPS16-201ENST00000380443 CCDC189A1A4V9 331 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 TRIM43BA6NCK2 446 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 GRID2O43424 1007 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 GJB3O75712 270 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 ZMPSTE24O75844 475 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 BAIAP3O94812 1187 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 TIMP1P01033 207 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 TPBGLP0DKB5 382 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 PFKLP17858 780 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 LPOP22079 712 aaPredicted RBP23.13■■□□□ 1.29
VPS16-201ENST00000380443 RGRP47804 291 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 NFKB2Q00653 900 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 SH2D4BQ5SQS7 431 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 Q6ZNB5 142 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 GLT6D1Q7Z4J2 308 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 CCNYL1Q8N7R7 359 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 TRIM43Q96BQ3 446 aaPredicted RBP23.13■■□□□ 1.29
VPS16-201ENST00000380443 TMA16Q96EY4 203 aaKnown RBP23.13■■□□□ 1.29
VPS16-201ENST00000380443 AARSD1Q9BTE6 412 aaKnown RBP23.13■■□□□ 1.29
VPS16-201ENST00000380443 SYTL2Q9HCH5 934 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 LSM7Q9UK45 103 aaKnown RBP23.13■■□□□ 1.29
VPS16-201ENST00000380443 RAI2Q9Y5P3 530 aa23.13■■□□□ 1.29
VPS16-201ENST00000380443 TBL1XO60907 577 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 LILRB3O75022 631 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 LUC7L3O95232 432 aaKnown RBP23.12■■□□□ 1.29
VPS16-201ENST00000380443 PRLP01236 227 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 GM2AP17900 193 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 GCKP35557 465 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 CPOXP36551 454 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 CDKN2DP55273 166 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 ARF5P84085 180 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 KLF10Q13118 480 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 PRPF38BQ5VTL8 546 aaKnown RBP23.12■■□□□ 1.29
VPS16-201ENST00000380443 NCEH1Q6PIU2 408 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 OR13C4Q8NGS5 318 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 MAPK15Q8TD08 544 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 ASB2Q96Q27 587 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 C15orf41Q9Y2V0 281 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 OR51F1A6NGY5 319 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 A8MT66 165 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 THRAP10827 490 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 GNAZP19086 355 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 CD9P21926 228 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 PGGT1BP53609 377 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms