RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TMEM25Q86YD3 366 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 ECT2Q9H8V3 914 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 CATSPERZQ9NTU4 200 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 ABCB8Q9NUT2 735 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 PCDHB9Q9Y5E1 797 aa19.9■□□□□ 0.78
PDLIM5-205ENST00000380180 CHD9Q3L8U1 2897 aa19.89■□□□□ 0.78
PDLIM5-205ENST00000380180 FZD6O60353 706 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 XYLBO75191 536 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 DNAJC8O75937 253 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 HNRNPA1P09651 372 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 PLK1P53350 603 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 HSF5Q4G112 596 aaPredicted RBP19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 LRRC8EQ6NSJ5 796 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 SPNS2Q8IVW8 549 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 EFHBQ8N7U6 833 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 OR6K2Q8NGY2 324 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 RDH11Q8TC12 318 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 PPM1EQ8WY54 764 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 LMLNQ96KR4 655 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 SORT1Q99523 831 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 UNKQ9C0B0 810 aaKnown RBP19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 OXSMQ9NWU1 459 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 KCNK4Q9NYG8 393 aa19.89■□□□□ 0.77
PDLIM5-205ENST00000380180 ATG2AQ2TAZ0 1938 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 TARM1B6A8C7 271 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 H0YHG0 523 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 TRIM13O60858 407 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 PRAMEF12O95522 483 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 SLC4A1P02730 911 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 CA3P07451 260 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 LPOP22079 712 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 ABCE1P61221 599 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 AP1S1P61966 158 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 PRSS36Q5K4E3 855 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 ZYG11AQ6WRX3 759 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 NAPRTQ6XQN6 538 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 GRASPQ7Z6J2 395 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 TBC1D1Q86TI0 1168 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 PIWIL2Q8TC59 973 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 TSPAN17Q96FV3 270 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 EVLQ9UI08 416 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 ZFP69BQ9UJL9 534 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 MID2Q9UJV3 735 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 DNAJC16Q9Y2G8 782 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 PRSS56P0CW18 603 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 PSMA3P25788 255 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 SERPINB3P29508 390 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 HLA-FP30511 346 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 CDKN2DP55273 166 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 NCALDP61601 193 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 SDCCAG8Q86SQ7 713 aaPredicted RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 RBM23Q86U06 439 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 CAMK1DQ8IU85 385 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 LEMD2Q8NC56 503 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 HEXDCQ8WVB3 486 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 RPL10LQ96L21 214 aaKnown RBP19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 ZSWIM3Q96MP5 696 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 LINC00597Q9H2U6 94 aa19.88■□□□□ 0.77
PDLIM5-205ENST00000380180 A0A0U1RQS6 177 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 OGNP20774 298 aaKnown RBP19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 CTSOP43234 321 aaPredicted RBP19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 EPHB1P54762 984 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 AQP5P55064 265 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 CSHL1Q14406 222 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 TSNAXIP1Q2TAA8 658 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 PITRM1Q5JRX3 1037 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 C9orf50Q5SZB4 431 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 ZNF549Q6P9A3 640 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 TTC8Q8TAM2 541 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 PPP4R1Q8TF05 950 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 SREK1Q8WXA9 508 aaKnown RBP19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 GPAMQ9HCL2 828 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 IGSF5Q9NSI5 407 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 XPR1Q9UBH6 696 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 HCFC2Q9Y5Z7 792 aa19.87■□□□□ 0.77
PDLIM5-205ENST00000380180 SOBPA7XYQ1 873 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 ZNF821O75541 412 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 PMLP29590 882 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 STC1P52823 247 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 SLC20A2Q08357 652 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 ARMC12Q5T9G4 340 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 CLNKQ7Z7G1 428 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 SKA1Q96BD8 255 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 TNKS2Q9H2K2 1166 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 NEDD8-MDP1E9PL57 170 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 PGLSO95336 258 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 CCDC166P0CW27 439 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 GKP32189 559 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 STK19P49842 368 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 ZBTB16Q05516 673 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 CBX2Q14781 532 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 TYSND1Q2T9J0 566 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 DGKKQ5KSL6 1271 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 ASTLQ6HA08 431 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 FAM45BPQ6NSW5 357 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 AFTPHQ6ULP2 937 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 METTL3Q86U44 580 aaKnown RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 WDR75Q8IWA0 830 aaKnown RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 TTC30BQ8N4P2 665 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 FAM45AQ8TCE6 357 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms