RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TRIB3Q96RU7 358 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 CCDC28BQ9BUN5 200 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 DCLRE1BQ9H816 532 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 COG4Q9H9E3 785 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 IGSF5Q9NSI5 407 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 NCKIPSDQ9NZQ3 722 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 MSRAQ9UJ68 235 aa10.52□□□□□ -0.73
POLR2J3-201ENST00000379340 ANAPC1Q9H1A4 1944 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 ANKRD36A6QL64 1941 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 GOLGA8QA0A0J9YX86 632 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 GOLGA8OA6NCC3 632 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 EPOPA6NHQ4 379 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 F8W8V4 182 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 GOLGA8NF8WBI6 632 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 MATN2O00339 956 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 MUSKO15146 869 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 HDAC3O15379 428 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 INSIG1O15503 277 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 DLX3O60479 287 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 DIAPH2O60879 1101 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PIGNO95427 931 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 S1PR4O95977 384 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 CR2P20023 1033 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PSMA3P25788 255 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PGM1P36871 562 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 GLRBP48167 497 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 NUMBP49757 651 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 CCNG1P51959 295 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 EPHB3P54753 998 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PFKPQ01813 784 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 DLG1Q12959 904 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 IHHQ14623 411 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 RAB30Q15771 203 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PABPC1LQ4VXU2 614 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 ACAD11Q709F0 780 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 OTOP2Q7RTS6 562 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 PTAR1Q7Z6K3 402 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 SDCCAG8Q86SQ7 713 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 CFAP52Q8N1V2 620 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 HEXDCQ8WVB3 486 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 HERVK_113Q902F9 699 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 FAR2Q96K12 515 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 DENND2DQ9H6A0 471 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 SLC28A3Q9HAS3 691 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 RC3H2Q9HBD1 1191 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 GPAMQ9HCL2 828 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 CD320Q9NPF0 282 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 INTS10Q9NVR2 710 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 NLE1Q9NVX2 485 aaPredicted RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 SPG21Q9NZD8 308 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 AGO1Q9UL18 857 aaKnown RBP10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 SSX2IPQ9Y2D8 614 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 VWA7Q9Y334 891 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
POLR2J3-201ENST00000379340 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 A0A0D9SEW6 157 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TRPC5OSA6NMA1 111 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 PRRG1O14668 218 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 PFDN6O15212 129 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 CD3EAPO15446 510 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 CIB2O75838 187 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TM7SF2O76062 418 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 WISP3O95389 354 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 FDXRP22570 491 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 PPM1AP35813 382 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 COPAP53621 1224 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 RPS24P62847 133 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 MXRA7P84157 204 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 SATB1Q01826 763 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 GALNT1Q10472 559 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 UBAP2LQ14157 1087 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 CSHL1Q14406 222 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TAF1AQ15573 450 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 ZRSR2Q15696 482 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TYSND1Q2T9J0 566 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TMEM31Q5JXX7 168 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 RBM20Q5T481 1227 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 PSRC1Q6PGN9 363 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 AFTPHQ6ULP2 937 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 ATG14Q6ZNE5 492 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 NET1Q7Z628 596 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 HJURPQ8NCD3 748 aaPredicted RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 RBM15BQ8NDT2 890 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 BLOC1S5Q8TDH9 187 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 UBXN10Q96LJ8 280 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TCF12Q99081 682 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 OLFM1Q99784 485 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 SPON2Q9BUD6 331 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 CERS4Q9HA82 394 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 EML4Q9HC35 981 aaKnown RBP10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 IL23AQ9NPF7 189 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 TCF7L2Q9NQB0 619 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 CATSPERZQ9NTU4 200 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 PLA2G4CQ9UP65 541 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 VPS9D1Q9Y2B5 631 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 ASB3Q9Y575 518 aa10.5□□□□□ -0.73
POLR2J3-201ENST00000379340 BRWD1Q9NSI6 2320 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms