RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 GRIA4P48058 902 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 CLCN5P51795 746 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 POU4F1Q01851 419 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 OVGP1Q12889 678 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 CCDC153Q494R4 210 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 TMEM215Q68D42 235 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 MBLAC2Q68D91 279 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 SPNS2Q8IVW8 549 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 TRIM42Q8IWZ5 723 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 NPAS3Q8IXF0 933 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 TNS4Q8IZW8 715 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 CENPLQ8N0S6 344 aaPredicted RBP17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 NAT16Q8N8M0 369 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 OLFM1Q99784 485 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 POLR3BQ9NW08 1133 aaPredicted RBP17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 COPG2Q9UBF2 871 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 MSRAQ9UJ68 235 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 CDH22Q9UJ99 828 aa17.39■□□□□ 0.37
THUMPD2-201ENST00000378727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ANKRD65E5RJM6 399 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 SLC9A3R1O14745 358 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 FGF3P11487 239 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 CTPS1P17812 591 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 KCNA4P22459 653 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 BCL2L1Q07817 233 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 DBN1Q16643 649 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 TAF1BQ53T94 588 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 C22orf39Q6P5X5 142 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ZCCHC23Q6ZST2 131 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 YTHDF3Q7Z739 585 aaKnown RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 KIAA0907Q7Z7F0 614 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 TMEM151AQ8N4L1 468 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 KCTD4Q8WVF5 259 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 MYLIPQ8WY64 445 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ISG20Q96AZ6 181 aaKnown RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ZNF395Q9H8N7 513 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 CATSPERZQ9NTU4 200 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 SLCO3A1Q9UIG8 710 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 DNAJC6O75061 913 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ALPIP09923 528 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 CRABP2P29373 138 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 MAPK8P45983 427 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 EPHB1P54762 984 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 DLG1Q12959 904 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 DHCR24Q15392 516 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 FAM78AQ5JUQ0 283 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 RARS2Q5T160 578 aaKnown RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 MRNIPQ6NTE8 343 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 C10orf107Q8IVU9 208 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 RAB3IL1Q8TBN0 382 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 CCT6BQ92526 530 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 EID2BQ96D98 161 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ASIC4Q96FT7 647 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 RMDN2Q96LZ7 410 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 GDF15Q99988 308 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 APOL5Q9BWW9 433 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 C20orf27Q9GZN8 174 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 NMRAL1Q9HBL8 299 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 KLHL14Q9P2G3 628 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ACOT9Q9Y305 439 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
THUMPD2-201ENST00000378727 REV3LO60673 3130 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 MYO9BQ13459 2157 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 CCT8L1PA6NM43 557 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 G3V2L1 256 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 SOCS5O75159 536 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 SNNO75324 88 aaPredicted RBP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 CYP17A1P05093 508 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 OGNP20774 298 aaKnown RBP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 ECT2LQ008S8 904 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 OCRLQ01968 901 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 RAB30Q15771 203 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 TYSND1Q2T9J0 566 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 HECTD2Q5U5R9 776 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 ATG16L1Q676U5 607 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 RYBPQ8N488 228 aaPredicted RBP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 ZNF557Q8N988 423 aaPredicted RBP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 C10orf82Q8WW14 230 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 GPR78Q96P69 363 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 SLC28A3Q9HAS3 691 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 MAGEE1Q9HCI5 957 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 BPIFA1Q9NP55 256 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 NPHS2Q9NP85 383 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 DUS2Q9NX74 493 aaKnown RBP17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 HACD3Q9P035 362 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 SLC25A13Q9UJS0 675 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 CRYL1Q9Y2S2 319 aa17.37■□□□□ 0.37
THUMPD2-201ENST00000378727 SBK3P0C264 359 aa17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 COL6A2P12110 1019 aa17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 CPA3P15088 417 aa17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 STC1P52823 247 aa17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 CDKN2DP55273 166 aa17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 RPL26P61254 145 aaKnown RBP17.36■□□□□ 0.37
THUMPD2-201ENST00000378727 SNRPD1P62314 119 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms