RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 APCDD1Q8J025 514 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 C2CD4AQ8NCU7 369 aaPredicted RBP19.5■□□□□ 0.71
SSU72-204ENST00000378726 OR6P1Q8NGX9 317 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 HDAC10Q969S8 669 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 MMADHCQ9H3L0 296 aaPredicted RBP19.5■□□□□ 0.71
SSU72-204ENST00000378726 TMEM216Q9P0N5 145 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 CLEC4EQ9ULY5 219 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 ARIH1Q9Y4X5 557 aaPredicted RBP19.5■□□□□ 0.71
SSU72-204ENST00000378726 PCDHGC4Q9Y5F7 938 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 DOCK6Q96HP0 2047 aa19.5■□□□□ 0.71
SSU72-204ENST00000378726 CCDC195A0A1B0GUA6 201 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 B2RBV5 119 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 PER2O15055 1255 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 BPGMP07738 259 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 PIRTP0C851 137 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 OCRLQ01968 901 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 NSUN2Q08J23 767 aaKnown RBP eCLIP19.49■□□□□ 0.71
SSU72-204ENST00000378726 BST1Q10588 318 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 USP10Q14694 798 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 FAM91A1Q658Y4 838 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 PTAR1Q7Z6K3 402 aaPredicted RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 TRIM42Q8IWZ5 723 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 CALML6Q8TD86 181 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 RMDN1Q96DB5 314 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 ZNF358Q9NW07 568 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 SIRPGQ9P1W8 387 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 STX18Q9P2W9 335 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 ARL5AQ9Y689 179 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 WASF2Q9Y6W5 498 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 CHD7Q9P2D1 2997 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 CAPN14A8MX76 684 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 BIRC5O15392 142 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 PLIN3O60664 434 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 MT-CO1P00395 513 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 ENO1P06733 434 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 MXRA7P84157 204 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 LAMB3Q13751 1172 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 RCN2Q14257 317 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 IRGCQ6NXR0 463 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 RAPH1Q70E73 1250 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 PLD6Q8N2A8 252 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 STMN2Q93045 179 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 E2F7Q96AV8 911 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 SH3GL3Q99963 347 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 TASP1Q9H6P5 420 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 KCNK4Q9NYG8 393 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 FCF1Q9Y324 198 aaKnown RBP19.49■□□□□ 0.71
SSU72-204ENST00000378726 RAI2Q9Y5P3 530 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 DENND4CQ5VZ89 1909 aa19.49■□□□□ 0.71
SSU72-204ENST00000378726 LAMA3Q16787 3333 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 CCL22O00626 93 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 SLC7A4O43246 635 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 BUD23O43709 281 aaKnown RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 GSRP00390 522 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 SP100P23497 879 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 DDX6P26196 483 aaKnown RBP eCLIP19.48■□□□□ 0.715e-16■□□□□ 8.5
SSU72-204ENST00000378726 ARSDP51689 593 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 PRAMEP78395 509 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 TMPRSS15P98073 1019 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 ARHGAP15Q53QZ3 475 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 ZNF697Q5TEC3 545 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 FAM109BQ6ICB4 259 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 ARID3BQ8IVW6 561 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 DCAF4L2Q8NA75 395 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 GABPB2Q8TAK5 448 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 TDRD1Q9BXT4 1180 aaKnown RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 DLGAP2Q9P1A6 1054 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 TLK1Q9UKI8 766 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 LRCH1Q9Y2L9 728 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 MYLKQ15746 1914 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 PDE4DIPQ5VU43 2346 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 PRLP01236 227 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 CA3P07451 260 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 KITP10721 976 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 CD151P48509 253 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 RHOAP61586 193 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 PTPRCAPQ14761 206 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 CHI3L2Q15782 390 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 SLC5A9Q2M3M2 681 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 C9orf50Q5SZB4 431 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 ATG16L1Q676U5 607 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 KIAA0408Q6ZU52 694 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 FIBINQ8TAL6 211 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 TBATAQ96M53 351 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 FAM161BQ96MY7 647 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 C7orf26Q96N11 449 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 C2orf49Q9BVC5 232 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 KIAA1522Q9P206 1035 aaPredicted RBP19.48■□□□□ 0.71
SSU72-204ENST00000378726 LHX3Q9UBR4 397 aa19.48■□□□□ 0.71
SSU72-204ENST00000378726 MTCL1Q9Y4B5 1905 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 CYBBP04839 570 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 HOXA9P31269 272 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 RAP1GDS1P52306 607 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 NTHL1P78549 312 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 IRF9Q00978 393 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 LMAN2Q12907 356 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 FASTKD1Q53R41 847 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 RETSATQ6NUM9 610 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 NCEH1Q6PIU2 408 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms