RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 IFI44Q8TCB0 444 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 LMX1AQ8TE12 382 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 UBXN4Q92575 508 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 CSPG4P5Q96PW8 444 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 EPAS1Q99814 870 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 MAK16Q9BXY0 300 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 SYNDIG1Q9H7V2 258 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 CWC15Q9P013 229 aaKnown RBP13.87□□□□□ -0.19
PRPF18-202ENST00000378572 HS3ST3A1Q9Y663 406 aa13.87□□□□□ -0.19
PRPF18-202ENST00000378572 TRPM6Q9BX84 2022 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 LOC400499M0QZD8 3231 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 CPED1A4D0V7 1026 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 C16orf96A6NNT2 1141 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 APOC4-APOC2K7ER74 178 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 K7ESM1 405 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 TSPAN6O43657 245 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 OPA1O60313 960 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 CST8O60676 142 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 CSO75390 466 aaKnown RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 APOC2P02655 101 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 MPOP05164 745 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 RHOQP17081 205 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 JUNDP17535 347 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 TGM2P21980 687 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 ABL2P42684 1182 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 FNTAP49354 379 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 THOP1P52888 689 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 GABREP78334 506 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 ADCY2Q08462 1091 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 MMRN1Q13201 1228 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 FGL2Q14314 439 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 CDKN3Q16667 212 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 ATXN7L2Q5T6C5 722 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 KAZNQ674X7 775 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 DRICH1Q6PGQ1 229 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 PCDH19Q8TAB3 1148 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 SNIP1Q8TAD8 396 aaKnown RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 IFT43Q96FT9 208 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 BMFQ96LC9 184 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 NDFIP2Q9NV92 336 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 ZNF212Q9UDV6 495 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 GGT7Q9UJ14 662 aa13.86□□□□□ -0.19
PRPF18-202ENST00000378572 ARID1BQ8NFD5 2236 aaPredicted RBP13.86□□□□□ -0.19
PRPF18-202ENST00000378572 SCAMP1O15126 338 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 AP1G1O43747 822 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 USP12O75317 370 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 LRIG2O94898 1065 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 XPAP23025 273 aaPredicted RBP13.85□□□□□ -0.19
PRPF18-202ENST00000378572 CXADRP78310 365 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 FZD2Q14332 565 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 DEFB133Q30KQ1 61 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 TBC1D25Q3MII6 688 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 ZNF805Q5CZA5 627 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 TEX35Q5T0J7 233 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 MANEALQ5VSG8 457 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 CCDC70Q6NSX1 233 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 PQLC3Q8N755 202 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 OR2AP1Q8NGE2 309 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 CXorf40AQ8TE69 158 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
PRPF18-202ENST00000378572 RAB7BQ96AH8 199 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 KLHL32Q96NJ5 620 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 OSBPL1AQ9BXW6 950 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 MAGEB5Q9BZ81 275 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 MAGEH1Q9H213 219 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 PCYOX1Q9UHG3 505 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 RAI2Q9Y5P3 530 aa13.85□□□□□ -0.19
PRPF18-202ENST00000378572 SPTY2D1-AS1A0A0U1RR47 76 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FAM72CH0Y354 149 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 EEF2KO00418 725 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 APOL1O14791 398 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 AQP9O43315 295 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 IGSF6O95976 241 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 GSRP00390 522 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 NME1P15531 152 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 PCBP4P57723 403 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 TPI1P60174 286 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 RHOAP61586 193 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 RAD51Q06609 339 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 DPYSQ14117 519 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 DHX34Q14147 1143 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FAM72AQ5TYM5 149 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FAM72DQ6L9T8 149 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 ZCCHC8Q6NZY4 707 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 CRTC1Q6UUV9 634 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 RFX8Q6ZV50 586 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 EFL1Q7Z2Z2 1120 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FAM72BQ86X60 149 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 PLD5Q8N7P1 536 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 MAGOHBQ96A72 148 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 ISG20Q96AZ6 181 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 KRT12Q99456 494 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 C1QTNF7Q9BXJ2 289 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms